FastQCFastQC Report
Thu 10 Sep 2020
HHH35BGXF_n01_1801_d08.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHHH35BGXF_n01_1801_d08.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences168
Sequences flagged as poor quality0
Sequence length151
%GC44

[WARN]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CTTAGAATGAAATAGAGTCTGCAGTATTGAGAGGATTTCTAATCCTCGGC10.5952380952380952No Hit
GTCCTACATCGTCGAAAGATCATCAGCTGTAAATGGAACGTGTTACCCTG10.5952380952380952No Hit
GCCTAATCTGAGACAAGTTAATTATCAATATAAATATGATGGTAAATTCT10.5952380952380952No Hit
CCTCAATTGCTCCATATAGCCCTTCAAGATCAAAGGTTCCAGGTTCCAGG10.5952380952380952No Hit
CTATCATACACATTGACACAAACATGTAACCATGCCTTCACATAATGGCA10.5952380952380952No Hit
GCCCGGCTCTGGTCTCCTGGGGTCTCCCTCGAATCAACTCCCCATAAAAC10.5952380952380952No Hit
CATTAATACCATTATCAGTTGTAGTGCCCTTCATTGGCTCTTGTTACAGT10.5952380952380952No Hit
GGTACTGATCCAAAATGGAAGACTTTGTGCGACAGTGCTTCAATCCAATG10.5952380952380952No Hit
GAATGAAACTTAGATTTCAAATCAAGTGTCCAAGGACGCCACCATAAAGC10.5952380952380952No Hit
AGTAGAAACAAGGTCGTTTTTAAACAATCGACACTAATTGATGGCCATCC10.5952380952380952No Hit
GAAAGCATATAGTGGAGCGGATTCTGGAGGAAGAATCTGACGCGGCACTT10.5952380952380952No Hit
GAGCTTAAATAAGAAATCAAAAACTTCCAACAAGCAAAAGTCAAGGACCC10.5952380952380952No Hit
GGATTATGTCCTGAGCCAAAGGCACAAGCTTCAATGACTGAACCACCCCA10.5952380952380952No Hit
TTCATAAACACAGAGACTAAAAAACATGCTACTGAACAACCAGTTGGGTT10.5952380952380952No Hit
AGCAGGTACTGATCCAAAATGGAAGACTTTGTGCGACAGTGCTTCACTCC10.5952380952380952No Hit
GGATACACCATGGACACAGTCAACAGAACACATCAATATTCAGAAAAAGG10.5952380952380952No Hit
AGTTGATGGAGATGATGATGGAGCTGATGGTGTGGGTGAGGTAGATGATG10.5952380952380952No Hit
ATTCCAGGGACACCCCGTACTACCCCATGGCAGCCACCCAGTGGATGCCG10.5952380952380952No Hit
TATTTGGGGCAGGTTCCAAATGCATATTTACTGATATTGTGGAATGGCAA10.5952380952380952No Hit
GCTTTCAGGTAGACTGCTTTCTTTGGCATGTCCGCAAACGATTTGCAGAC10.5952380952380952No Hit
CTCCACAGAAACTGTGGACACGCTAACAGAAACCAATGTTCCTGTGACAC10.5952380952380952No Hit
CTCAATGTTTATTCACTAGAGAGAAAACACTTGAACATCACACCTTAGCG10.5952380952380952No Hit
CCTCTATTTTCTGCCTTTCTAGTCTTGATTACTCTCTATACTTTCTCCTA10.5952380952380952No Hit
CCAGCGAGCCATGGAACAGGAACAGGATACACCATGGACACAGTCAACAG10.5952380952380952No Hit
GAAGAATCCTGAAGACTGATTTAAAAGGTGGTAATTGTGTAGTGCAATGT10.5952380952380952No Hit
CAAATAACAATACTACTAGTAGTAACAGCAATCAATCCAGATAAAATATG10.5952380952380952No Hit
ATTTTAGTGCATGTGTGAGGAAGGAGTTGAACCAAGATGCATTAAGCAAA10.5952380952380952No Hit
CTTAATCCTCCCCCAAACCCATTCGCAGATATATTAACTGAGGCTCAGAG10.5952380952380952No Hit
AGCAGTCGCATTTCTATCATCCCCAGTGACACAAACATGTAACCATGCCT10.5952380952380952No Hit
AAGATATTCACTCTGGAAATCATAAAAGAAAGAAGAAATTTGAGTTATCA10.5952380952380952No Hit
GTTGCACTCAGTTACTCAACTGGTGCGCTTGCCAGTTGCATGGGTCTCAT10.5952380952380952No Hit
CTCTAAGTGTTTCTAGATCGAAAGTCTTACTGTACTATTCAATTTGATGT10.5952380952380952No Hit
CTGTTCAGCTGTCTACTAATGACCAGTAGAGAGATTAAATAAGAAATAAA10.5952380952380952No Hit
GGATTGTAGAATTTGGTTTGCAGATATTTGGGTGAGGATTTTTATGTTTA10.5952380952380952No Hit
GTTCATATCGGAGGCCAGTTGGAATTTCCAGCATGATGGAGGCCATGGTG10.5952380952380952No Hit
TGTTCCAGCCTCATTGGCAGGTAGGGAGAAATGAGGTTTGTTATACAGTC10.5952380952380952No Hit
CCCTTTTTCTGAATATTGCTGTGTTGTGTTGTCTGTGGATACACCATGGC10.5952380952380952No Hit
TTGTGCGACAGTGCTTCAATCCAATGATTGTCGAGCTTGCGGAAAAGACA10.5952380952380952No Hit
ATCAAGTCAAAATACGCCGCAGGGTTGACATGAACCCTGGCCATGCAGAT10.5952380952380952No Hit
CTATACTACTAGTAGTAACAGCAAGCAATGCAGATAAAATCTGCATCGGC10.5952380952380952No Hit
GGAGGTTTCTCGATTCAGCTGAAACTCCGTCGAGTTGTGGAGCGGAATAT10.5952380952380952No Hit
CCATATAGCCATGGAACAGGAACAGGATACACCATGGACACAGTCAACAG10.5952380952380952No Hit
CCTAAAAAGTCCCAGAGTAAATCAAGGGAAATCACTCAGAAGCCCTAACT10.5952380952380952No Hit
GGGGAACACCAGCGCTTTTGCGTCCGACATCGCAGCCGACGTGAGAAGGC10.5952380952380952No Hit
GACTTCACATGCATTTATCAAATAAATATATAGAGAATATATGAACAAAG10.5952380952380952No Hit
GGCCGGTCCCCAGCAAGGAAGAACATAACATGGACTTGCGGGTCGGGACA10.5952380952380952No Hit
GCTGGAGTCTGTCTCAGATCTTCACCAAAATGCAGAAGACAAGGCAGTTA10.5952380952380952No Hit
GGAATGCTGTGTGCAACAAGCCTGGGACATCCCCTCATTCTAGACACATG10.5952380952380952No Hit
GGGGCTACGAAGACCCCGAAGGAGAAACACGGGGAGGTTTAGTCACTTGG10.5952380952380952No Hit
TGTGAGGAAGGAGTTGAACCAAGATGCATTAAGCAAAACCCAGGGATCAT10.5952380952380952No Hit
CCACAACTATTTTAGTGCATGTGTGAGGAAGGAGTTGAACCAAGATGCAT10.5952380952380952No Hit
AGACAACACCAAATGGAATGAGAATCAGAATCCTCGAATATTTCTAGCAA10.5952380952380952No Hit
GCTCCACACAGCGCATAATGGAATGCGGTGTGCAACAAGCCTGGGACAGA10.5952380952380952No Hit
CATGAGAGATGACCCTAAATGTTCCCCACGTGATAATTCTAACTACCAGT10.5952380952380952No Hit
CTTCTCTAGGTATCCAAAGGAAGATTATGGCAGGAAAACCATGGCTCACC10.5952380952380952No Hit
ACAAATAAGTTCGCTGCAATATGCACACACTTAGAAGTCTGCTTCATGTA10.5952380952380952No Hit
CAATAAACAAGTGATATCTCCTTCCAGATCTTGATTAACAATTCATAACA10.5952380952380952No Hit
TTTTCATGAAGGACAAGCCAAATTCACTTCCCTTGCCGTCCGAGCTCTTC10.5952380952380952No Hit
ATTTTAAGCTGGTGCTAAACAACGAACTGGGATACCATAATAAATAGGAC10.5952380952380952No Hit
GAATAACAGATCAACAAAGAGCTGGTTCTTTGAAAAGAACAAAGCTGACA10.5952380952380952No Hit
ATGCAATAAGTACCACATTCCCTTATACTGGAGATCCCCCATATAGCCAT10.5952380952380952No Hit
TCCCTGGGTTTTGCTTAATGCATCTTGGTTCAACTCCTTCCTCACACATG10.5952380952380952No Hit
CACAGATACTTGGGAGGTCTCGATAAGGGCCGTGCTGGCCTCATAAAATG10.5952380952380952No Hit
GCAAGATCCATTGGACATCGCCCAGAACAGGAAGGCAGCAAACACCATTG10.5952380952380952No Hit
ATCTTACACTAAATCAATATGAGACAAGTGCAATCAACATTCCGTAACCT10.5952380952380952No Hit
CCCACGACCTGAAAGAAAATAGAACAATTGCTGCGAAATAGCTACAGGCG10.5952380952380952No Hit
CATCCCATCAGGCCCCATCAAAGCCGAGATCGCGCAGAGACTTGAGGATG10.5952380952380952No Hit
ACTGCCAGTATGAGACTATTAACTCTTACATATTTGGGGCAGGTTCCAAA10.5952380952380952No Hit
GTACTAAAACCAGGCCAAACATTGCGAGTACGATCCAATGGGAATCTAAT10.5952380952380952No Hit
TTCTACAGGAGTATGAGATGGCTGACTCAACAGAGCGGTTTTTACCCTGG10.5952380952380952No Hit
CTTTTGAGTCAGCCATCTCATACTCCTGTAGAATGAACCTGAACATGCTC10.5952380952380952No Hit
GCAAAGGCTCATAAGAATGTACTATGAACAATTACACCCCAACAAGCTGG10.5952380952380952No Hit
ATTCCAGGTTGTGTCTGGGAAGATTTGGATTCTTTGGTAGGAACTAGCGG10.5952380952380952No Hit
GCCGTGCACTGAGCAATTGAGAAATGAAAAGAAAGAAAGAAAAAAACAAA10.5952380952380952No Hit
GCCCTGGGTGCTGCGCCATTCCAGGACCGGGTTAGCCTCGCTATGACGGC10.5952380952380952No Hit
CTGCTAGGGAAGAATTTCTCGAATAGAGTGCAGCACTTCTGGTACATACC10.5952380952380952No Hit
GAAATGATGATGTTGACCAAAGTTTAATCATTGCTGCTAGGAACATTGTC10.5952380952380952No Hit
GCATTCTGCTGTTCCTGCCGATACTCTTCCCTCATAGACTCAGGCACTCC10.5952380952380952No Hit
AAGAAGTACACATCAGGAAGACAGGAGAAGAATAACGCTCTTAGAATGAA10.5952380952380952No Hit
TCTGAGTGCCACCCCAAAGCGGCCACTGATGCCCGAGTCAGCTGCAGGTG10.5952380952380952No Hit
AGGCTGTTGAACACAGATTTTGCTAGTAAGGTTCTGCACACCTTCCCGAT10.5952380952380952No Hit
GAAAGTATAGAGAGGAATCAAGACTAGAAAGGCAGAAAATAGAGGGGGTT10.5952380952380952No Hit
ATTCTCTGTAATTCTTAACCTATGTCGCATTTCTTCAATTAACCCTCTTA10.5952380952380952No Hit
ATTTTACTGCATTAATACCATTATCAGTTGTAGTGCCCTGCATTGGCTCT10.5952380952380952No Hit
TACCAGAAGTGCTGCACTCTATTCGAGAAATTCTTACCTATCAGTTCAAA10.5952380952380952No Hit
AGTAGAAACAAGGCATTTTTTCATGAAGGACAAGCCAAATTCACTTCCCT10.5952380952380952No Hit
CGATAAATGCATTTGAAGAAAAGACGATCAAGAATCCACAATATCAAGTG10.5952380952380952No Hit
GGGCGAGGCCGCCCGCGGGGTCGGGCCAGCCGCCCGGCCCCTCGTGACGG10.5952380952380952No Hit
TTTATATGTAGTACTTCTCATGGTATTTGCTATGGACTGAATGGTGTTCC10.5952380952380952No Hit
GTACTAGTGGCGGAAAGTCCCACCCGATCATATCAGCTCATTCCTGAAGC10.5952380952380952No Hit
ATCCAATGATTGTCGAGCTTGCGGAAAAGACAATGAAGGAATATGGGGAA10.5952380952380952No Hit
CCGCACCACAGAGACTACACCACATGAGAATTCACACCCACGGTGTGTCA10.5952380952380952No Hit
GTCCCTAAGTGCTTGAACAATGAGTAGTAGTTTTCTCGATTCAGCTGAAA10.5952380952380952No Hit
AAACAAGGAACTTTTTTAGACAGTATGGAAAGCAAATAGTAAAATTTACA10.5952380952380952No Hit
CCCCAGACACTGGGTACCCGCGAACAGACACCAATGGTCCTCTGACCCAG10.5952380952380952No Hit
GGATTCCACAGGCCAGAGAAGATGACCCCACTACGCCGCCCGGGCTCACC10.5952380952380952No Hit
AACGTACGTTCTCTCTATCATCCCATCAGGCCCCCTCAAAGCCGAGATCG10.5952380952380952No Hit
GGGAAGACCCGAAAATTGAAACAAATAAGTTCGCTGCAATATGCACACAC10.5952380952380952No Hit
AGTTTTATTAGAGCAATATGAACAACATAAGCATCACTCAAAAACATAAT10.5952380952380952No Hit
GATTTACACATTACTGCCTGGTCCATTCTAATGCAAAGGGGCCCTGTCAC10.5952380952380952No Hit
GTCCCTAAGAGGAAGAGGCAGCACTCTTGGTCCGGACATCAGAACTGCCA10.5952380952380952No Hit
CAATAAGATGGAGTTTGAACCATTTCAATCTTTAGTACCAAAGGCAGCCA10.5952380952380952No Hit
AAACAAGGCATTTTTACATGAAGTACCAGCCAAATTCACTACCCATGCCT10.5952380952380952No Hit
CTGCAGGCGCCAAGCTTGAATGAAGAGGCCTTTGTAATACGGATAGAGAG10.5952380952380952No Hit
ATGGAAAGTCAAAGAATGCATCTAATAGAATAACGAACACCAAGACGACT10.5952380952380952No Hit
GCAAACCCCATTGCAAGCACAAGAGATGAGGCGACAGTCGAATAAATGGT10.5952380952380952No Hit
GAGAGTGGACAGTGTGGCTAGAACGCAGCTCGGAAGCTTGGCAGAAGAAG10.5952380952380952No Hit
GTATGGATAGCAAATAGTAGCATTGACACAACTATTTTAGTGCATGTCTG10.5952380952380952No Hit
GGTTTTAGCAGCGTCTTGACATAATGATTTGAGAATTGAAATCTATCAGC10.5952380952380952No Hit
GTGGTGAATAGCATCTGCAACACAACAGGAGTCGATAAACCCAAATTTCT10.5952380952380952No Hit
GTAGAAACAAGGTCGTTTTTAAACAATTCGACACTAATTGATGGCCATCC10.5952380952380952No Hit
CCCCCCGGGTGGGTCCTGCGATCAGGGCCCTGCGCATGGCAGGTGGTCAG10.5952380952380952No Hit
TTTTTGGACAGTATGGATAGCAAATAGTAGCATTGCCACAACTATTTTAG10.5952380952380952No Hit
TAATTGAACTGAGCAATCTTACGAAAGGGGAGAAAGCTAATGTATTGATA10.5952380952380952No Hit
CAAGAATTAATTGTGTTTATTTACACATGAAAAAAAAAAAAAAACCACAA10.5952380952380952No Hit
AATCTCACCATTACCTTCCCTTCCAGGACATACTGACGAGGATGTCAAAA10.5952380952380952No Hit
AAATTATGAATATAACCATTTAGAATCGCGACAAATTAAAATTAAAAATA10.5952380952380952No Hit
GCCCCATGTTGGCACAGCTGTCCTCATCATGGAGGATGCCTGGCCCTCAC10.5952380952380952No Hit
AGGCCAATGTTTACTAACAGGAGTGTTTCACACCTGGTACCAGCCCACAT10.5952380952380952No Hit
CATTAATGCCTCGCTTTATCATCCGAATTAGTTCCATTACCATTGTCCCG10.5952380952380952No Hit
CCGATATGAACTGCTAGGGAAGAATTTCTCGAATAGAGTGCAGCACTTCT10.5952380952380952No Hit
ATCTCATACTCCTGTAGAATGAACCTGAACATGCTCTGCTTGTTCCAGTG10.5952380952380952No Hit
CTCTCATACTCCGGTAGACGGCACCTGAAAATTCGCTGCTTGTTCCAGTG10.5952380952380952No Hit
GGGATGACCTCATGGTCCAGGTGACACACCTGCAGGGAGGAGACACAGCA10.5952380952380952No Hit
TCCCAGGACCCTGGGATCATGACCTGAGCTGAAGCCAGGTGCTAAACAAA10.5952380952380952No Hit
ACACCGGAAGAAATTTGGGTTTATCGACTCCTGTTGTGTTGCAGATGCTA10.5952380952380952No Hit
GATGTGTATAAAAGTGCTTTATAAACTAGGAGATACTGCCCAATTATGAA10.5952380952380952No Hit
CTACTAGTAGTAACAGCAAGCAATGCAGATAAAATCTGCATCGGCCACCA10.5952380952380952No Hit
GCAGGGAACAGTCGAAAACGCAAATGGTATCTCAAGGATGAGGCATGGTT10.5952380952380952No Hit
GTGTACAGAGTATGAATATTAAACTTTCAAATTTTTATAAATAACTTTTT10.5952380952380952No Hit
ATCTGGGACAAGGGAGGGCCAATGGGCACAGCCATTCCCAACAGTCCATC10.5952380952380952No Hit
CAATCCGTGCATCAATTCGGGCCCTAGACACCATGGCATCCATCATGCTG10.5952380952380952No Hit
TGCCCGCTCCCTGGGACATGGCCCATCAAAGTAATGACTCCCAACCCCTG10.5952380952380952No Hit
GTGCCGAGCTTACCGCCCAGTATTAATAACTCTGCTGTGTTGAGTCGATA10.5952380952380952No Hit
CTCCCATACTCTCTCATTATCCATTTTTCTCATCTGTTCAACTGTAGTCA10.5952380952380952No Hit
GTATTGGAGTCAGGATATGGTCATTGGAGAAGAATTTATTGTGTTTATTT10.5952380952380952No Hit
CATCACTGCTTCTCCAAGTGAATCTCTGTAGAGTTTAAGAGACTCGAACT10.5952380952380952No Hit
GCGTCTAACTACCCCACAATAGCTTTTTGACGTTAAGGTATAGTTCTGGA10.5952380952380952No Hit
GCTCCATGGTATGGACACGTTCTTTCAGGAGGGAGCCATGGAAGAATCCT10.5952380952380952No Hit
CACTGTGGCATCGTGACTTGTGATTAACTAGTTTCTGGGTTTCTGTCCGC10.5952380952380952No Hit
CTTCTCTCAATGAACCCCCATCCAGACACAAGATCACAACGGAAACATCA10.5952380952380952No Hit
CTATTGCTCCTTCATCTGTAAACGCTCTAAGTAGTATCAGAGCTTCAAGT10.5952380952380952No Hit
AAGTAGTTCCTTCTCATGCTTGCAATTTGCTCAATTGGGGCAACATCTTC10.5952380952380952No Hit
CGTGTAAGGACCCTAAAAATCTCCCATAAAGTCAGAGAGCATCGTAACAA10.5952380952380952No Hit
CTAGACACCATGGCCTCCATCATGCTGGAAATTCCAACTGGCCTCCGATA10.5952380952380952No Hit
CAGACAGTGGTGCGAGTAAAACATCAAGTTTTGTATATGTTTACATATAA10.5952380952380952No Hit
CTTTTAATCCTATGATATGAGATATGATCTCAAAGTAATTGTCTGATTGG10.5952380952380952No Hit
TGCCCAAGAATTGCTCCACACAGAGCATAATGGACTGCTGTGTGCAACAA10.5952380952380952No Hit
CAACCCAATGATTGTCGAGCTTGCGGAAAAGACAATGAAGGAATATGGGG10.5952380952380952No Hit
CATTAGGAATTGGGAGACTGTAAAGATCCAATGGTCCCAAGAACCCACCA10.5952380952380952No Hit
CATTCATCTCCACAAATCGAAGCATATTCAGCTGACAAGAGAAAACTACT10.5952380952380952No Hit
TGCGGAATGTGGGAGGGCTTTGTTATGAAACAAAGGTATGTGTAGTACAA10.5952380952380952No Hit
GCTTTCAATATGATGGTTTTACCCATTACTGCCTGGTCCATTCTAATGCA10.5952380952380952No Hit
GTATAGGTGGGTGGGTGATGTATGCCCCACACGAAAAGAATGCTCTTTCC10.5952380952380952No Hit
GGCAAACCATTTGAATGGATGTCAATCCGACTTTACTTTTCTTAAAAGTG10.5952380952380952No Hit
CACTTAGAAGTCTGCTTCATGTATTCAGCATACCATTTCATTGACGATCG10.5952380952380952No Hit
GCACACAATGCAGATAAAATCTGCATCGGCCACCAGTCAACAAACTCCAC10.5952380952380952No Hit
GTGCCAGCGCAAAATGCAATAAGTACCACATTCCCTTATACTGGAGATCC10.5952380952380952No Hit
TTTTTAAACAATTCGACACTAATTGATGGCCATCCGAATTCTTTTGGTCG10.5952380952380952No Hit
GACTAAGGGGATTTTAGGGTTTGTGTTCACGCTCACCGTGCCCAGTGAGC10.5952380952380952No Hit
GTAAGTCACATTCCAGGTTGTGTCTGGGAAGATTTGGATTCTTTGGTAGG10.5952380952380952No Hit
CTGTTATACACATCATAGTATTGCAGGCAGCAAATGTTCATTCAACAAGA10.5952380952380952No Hit
ATGTTATTTGTTGTAAGTTGAGACATCAAAACTACGACGAAATGAACTTA10.5952380952380952No Hit
TGGCTAATCCTGGGCACTTCGGATCAGCACGCGGATTTCTGCCGGCCTTC10.5952380952380952No Hit
GTAGAAACAAGGTCGTTTTAAAACAATTCGCCACTAATTGATGGCCATCC10.5952380952380952No Hit
CTATTGAAGGACTAGTCTATGGCAACCCTTCTTGTGACCTGCTGTTGGGA10.5952380952380952No Hit
CCCGGATACTGGAGATACCCCATATAGCCATGGAACAGGAACCGGATACA10.5952380952380952No Hit
GTATGGACACGTTCTTTCAGGAGGGAGCCATGGAAGAATCCTGAAGACTG10.5952380952380952No Hit

[OK]Adapter Content

Adapter graph

[OK]Kmer Content

No overrepresented Kmers