FastQCFastQC Report
Thu 10 Sep 2020
HHH35BGXF_n01_1797_d10.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHHH35BGXF_n01_1797_d10.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences101
Sequences flagged as poor quality0
Sequence length151
%GC47

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CGGCGGGCACAGGTCGGAGCTGAGGGCCCTGAAATATGCCTCTCACGCGG10.9900990099009901No Hit
GAGGCAGGCTGGGTGGGGGCCTGAGTTTGGGTCGGGGCCTGGGCCTGGGG10.9900990099009901No Hit
CTCTAAGTCTGGTTTTCTTTTTTTTTTCCTCTGTAAATAAACACAATAAA10.9900990099009901No Hit
GTGTGGGAGGATCCTTGTGCACTCTTATGTTGCATCAGTACCACTTTCAG10.9900990099009901No Hit
ATCTTGTATACTTTCACACGTATGAAAGTATGCCGTATTACGCAGGACAC10.9900990099009901No Hit
GAGGAAATGAATCGATTGACTCCTGAGATGAAAGAAGCGCATTCAAAAGA10.9900990099009901No Hit
GGCCAGTTCTGAAACCCCAGTACCCCAGGATGTAGACACCATGGCTCTTT10.9900990099009901No Hit
GTCATTTTCTTTAGGATTCAATCTTAGTAGGTTGAATGTTTCTGGAAATG10.9900990099009901No Hit
GTCCATCCAGTCAATGGAGGATTATTTGGCCACAGGAAGGAAGTATATAA10.9900990099009901No Hit
GCCTCTAGCTGTGCAAGGGTGCAGGCGGGAGGGAGACACAGAAGGGGGAC10.9900990099009901No Hit
GTTTCCCCTCTGTGTGCTCACTTTGCCTGCCGAAGTGAACCACGCGCAGG10.9900990099009901No Hit
CTAGGACCCTGAGATCAGGACATGAGCTGAAAGCAGACGCTTAACATGCT10.9900990099009901No Hit
TCTCAATAGTCAAATAAATAAATTGGGGTACACTCGCATAGACAAGGGCT10.9900990099009901No Hit
CTGCTCTGGAAGTCAGGAGACCCCCCTGCCCAGGGTTTTGTCCCGGGTTT10.9900990099009901No Hit
GGAGAGGCAGAGGGAGAGGGACAAGCAGACCCCCCGGTGAGCTGGGGGCC10.9900990099009901No Hit
CCGGCTAGCCTGCCTCCCTCAGGCTCCGTCAGGTCCCCGTTGCACCACCC10.9900990099009901No Hit
GTCTACGGTGAAGCGTGAGGTACCGTAGAGAAGAATTTCATGGCATTATC10.9900990099009901No Hit
CTGTGGGACTTGCTTGCTGTTCTTTCCTGCTTTGCCCCTTCTCTTCTGAA10.9900990099009901No Hit
GTTATTCTTGTTGGTGTTTTTTAAAAAATACATATCTTTCTGTTGTCTTT10.9900990099009901No Hit
CCTCAATGGGACCATTTAGGGGAGGATTTGAAGAAACAGGATGCTTTAAC10.9900990099009901No Hit
CTGCTCCCCGTCACAGCTCAGTTCTAATGCAGGGCTCTTCCTCTGCGCTC10.9900990099009901No Hit
GGGCGGGGCAGGGAGAGCAGGGGGGGGTGGCTAGCTGCTACCGGGGACCC10.9900990099009901No Hit
GGTGGAGGTCATGCGCGCTGAGCCCCCATGAATGGGATTAGTTCCCCTCC10.9900990099009901No Hit
GTGGCGGTCCTACATAACATTTTTACATGCTGAACTGCCTCAGCTTGCAA10.9900990099009901No Hit
ATGAAACACGTGACAGAAGAAAAGAAAAACTCAATAAAGGTGTGAGATGG10.9900990099009901No Hit
GACTTCACTGACTCACCCACACACGCAACCAACTGGCTTTTATCTTGAAA10.9900990099009901No Hit
GGCAGCAGCTGACCCGAGGGTGTGTCGGAAGCTGTGGGTGTGGGCAACAG10.9900990099009901No Hit
GCCTCCTGATGCCTTCCCGTAGACTCTCAAGTGAATTGCTTGCTTCCTGT10.9900990099009901No Hit
GCACAAGCATATGCTAGAGAAGAGAGGGTCAGAGGGAGAGAGGGTATCCT10.9900990099009901No Hit
TGCTGGGGGTCCCCCCGGGCCTTGTAGATGAAGATTTGCCCCAATTGCCG10.9900990099009901No Hit
CCAGGGGACTTCCTATACTAGGTATTGCACACAGTAATATATTTGTTGTG10.9900990099009901No Hit
CCGTTGCAGATCACTGGTGTCAGGGAACATCTCGCTCCTTGAGGAGGCTG10.9900990099009901No Hit
ACCTCATTCTACTGACATTATAAAACACTTCTGTGTTTAACACACGCTTT10.9900990099009901No Hit
GGATACAGCAGTGAGGGCGACTGGCCCAATCCCTGCCGCCATGGAGCAGA10.9900990099009901No Hit
GGCCCGGAAGCCATTTCCAAGTACAGATCTTTGCTCATTTCAGTCACTCA10.9900990099009901No Hit
ATTTGAGAGAGAGCACAAGCAGGTGGAGGGGCAGAGGGAGAGGGACAAGC10.9900990099009901No Hit
GGCCAGCAGCAGTAGCATCCGCACACCACACTCTGATTTCCCAACCAATG10.9900990099009901No Hit
GTTCAGAGTACTGCCTTTGAGTTTTTCTTTATGAACTAATACATAGTCAG10.9900990099009901No Hit
CCGCCCGAGGTGCCATTTTCAGAGTAAGCGGATTTACCAAAGATGTTCCA10.9900990099009901No Hit
GAGTTCAGAGGCAAACACAATTTTGGACCAGATGGGTTTTTAGACAAACA10.9900990099009901No Hit
GTGTATAAGAATGCCAGTAATTTCTGTACAATGACTTTGTATCCTGCCAT10.9900990099009901No Hit
GCTTTAAGAACTGCTCAATGCTTTCCCTGGCTCCTCACTTTTGCCTTCTG10.9900990099009901No Hit
CTACCTGTCTATGGGACCCTTCTCCTTGGGTCTAGGGTAATATTTACTAA10.9900990099009901No Hit
AATACGAGGATGGTAAATATAGTGCTTTATAAACGAGGAGCTACATACAA10.9900990099009901No Hit
TGTGTGGGGTGTGCTTTAACTGTATTGTTTTGTATAGGATAAATTTTGAC10.9900990099009901No Hit
TTCTAGGGGCACTTGAGAGAAGTATATTCCATTTGCTGCTTTTGGATGGA10.9900990099009901No Hit
CTTCCTCAGGTGAGAATATATCGTATAGGTTTGAAGTCCATGATGCATGG10.9900990099009901No Hit
CAGGAAGGAGAGCCCTGGTGGACAGCCTTCCCGGCCTCCATAAGGCAATC10.9900990099009901No Hit
TCTGAGGTCAAAAGCAAAATCGTTCCTGTGGGTTGAGAGAGAAGGCGATG10.9900990099009901No Hit
GAAAAGGATACATTTCCAGAAACATACAACCTGCCAGGAATGAATCCTAA10.9900990099009901No Hit
CATCTATGGGGCAGGATTGTCAAGAGTTGGCCTGTGGGAGAGACCTTGAA10.9900990099009901No Hit
GCGGCACGGCGACTCTGGGTTTGGAGCTCTTTGGGCATCCGCCGGCAGGG10.9900990099009901No Hit
ACATTATACACAGAAAGAAAAATTAATAGATGAATGAAAGGTGGCAACAT10.9900990099009901No Hit
GGGGCACAGGCCAACTCCCAGTGGTGCTCGCGTCCGCCGCATCCTTCGCG10.9900990099009901No Hit
GCGGCTACCCGCCGTCCGCCTTGAAAGAGTATGCAGGGCAGCAAGACTCG10.9900990099009901No Hit
CAATTCAACAGAGCTTAAACAATAAGCCACTGATGAATCATCTATTAAGG10.9900990099009901No Hit
ACAGCACACTATGCAGGTGTCTACTAATGAAAAGTAGACATTTTCATAAA10.9900990099009901No Hit
ATATAAATGCTGCCAATCATCTAAAAGAAAAAAAATGAATGGAGGTTGGA10.9900990099009901No Hit
GCCCAGGATAGTACTGAAATGGACTGAAACAAAATCTATTACTCGACGCA10.9900990099009901No Hit
ATTCCATTGTATGTGTATACCACATGTTCTTTTTTTTTTTTTTTCAAACA10.9900990099009901No Hit
CACCCGATCTCTGCTGAATTGAAGTTCCTTTAGAGTTTAGAAGTGAACAC10.9900990099009901No Hit
ACTAATCGGGTGCCCCATTTTAGAACCTGTTTTACTGCATTCTGTGAATT10.9900990099009901No Hit
GTAGAGGGATGACCTCATGGTCCAGGAGACACACCTGCAGGGAGGAGACA10.9900990099009901No Hit
TCACAAAAGTTATGATAATTAACATGACCTATCTTTTAATTATAAAAAAG10.9900990099009901No Hit
GGCCCCCAGCAATGCAGCAGCACGGCGGCCCCCTTGGCCCACCCCCGGCC10.9900990099009901No Hit
CTTCCTTATTCACTTAGTTTATTAACTCCTCCCACCCCTCACTAACCCCC10.9900990099009901No Hit
CCTCCATTCTCAGCCTCCCAAACAGAACCCTGCACAGCAAGACTGGTATG10.9900990099009901No Hit
TAATAATACTTATAGTATCTTAAAAAATGTGAAGAAATAAAGAATTGTCA10.9900990099009901No Hit
AGATAGAGGAATGGCACGTACATGGAGAGAGGAGGAATTGTGGGTACTCA10.9900990099009901No Hit
CACTTTAGCCAAGTGTCATGTATAGTCATAAAAAAGAAAAATGGAAAGTT10.9900990099009901No Hit
GGGCCGGCCCGTGGGCTCCTGCGCTGTGGTGCCGGCAGAGGCTTAACCCA10.9900990099009901No Hit
GTTGAAGGGGCAAAAAGGCTGGTAGGCAGAGCTCCAGGGCCGGGCAAGCT10.9900990099009901No Hit
TATCATAAGAGCACACAAAGAGAAGAACTACCAATTCCCGAAAGTCCAGG10.9900990099009901No Hit
TCGTCCCTGTGTCCTCAGAGGAAGGCTGTGTCTGACAGCCGGGGTGACCT10.9900990099009901No Hit
GGGCTGCCCAGGGCGCTCCGGCCGGGCTCACGGCCAGGAAACTAAATTCC10.9900990099009901No Hit
GACATCTGACTGTTCAGCTGTCTACTAATGACCAGTAGAGAGATTAAATA10.9900990099009901No Hit
GTATTTCTGTGTTCCTATTTTGTTTTGACAATGAAACCAATTGGGTTGTC10.9900990099009901No Hit
GGTTATAGGAGCAGTCACCTTCGTGGGGAAGTGGGAGCAGTCTTCGGCTA10.9900990099009901No Hit
GATATGCACAGTGTTAAATTCAAGCCCAAGTTACTGAATGTCTGTTGTCT10.9900990099009901No Hit
GGGCAGGCAGCCGCAGTGCAGCAGGGGCGCCCTAGCTGTCCCTTAAGCCT10.9900990099009901No Hit
CATTTACACAAACGGCCCTTCGACGGTTGGCATATCTATCCCAAGGAAAA10.9900990099009901No Hit
TTGCGGCTCCGTATGGCAAGGAGGAGTGAGGCCCCGCTGTCTTCTTTGCC10.9900990099009901No Hit
GTCTAGAACTGGAGGCACTCTCTAGTGAGTGCTTACTTTAATTTAGGGCT10.9900990099009901No Hit
ACATATACTTGCTGTGTGACCTTGGGCAAGTCGCTTTACCTCTCTCTGTG10.9900990099009901No Hit
TAGAAAAGGCAAGCATGCGACGGACACGGAAGGCATGGCACACGACATTC10.9900990099009901No Hit
TTGTTCAACTCGCGAATATATCAAATCACCGTATATTCACGTGATTTTAT10.9900990099009901No Hit
GGGGACAGAAAAGAGGAGTGACGAAAGGAGTGAGCCCCAGACGTGGTGGG10.9900990099009901No Hit
GCCGGGCGGCCGGGGTGCGTACAGGTCGGGCACAGCGCTGCTTTAGCCAG10.9900990099009901No Hit
CTTTCATCCCCTCCAAACACAGAAGTGAGGATGAAAATGTAGAGTTCTAG10.9900990099009901No Hit
CCTCTGAAGGGAGTCGCACTGTCTATCAACCCCCTCTATAAGATCTCACA10.9900990099009901No Hit
ACTCCATCTATTCTTCTAATTTGCACATTTAAATAACATTTTTCATAAAG10.9900990099009901No Hit
TAGTAGTACTTACATATTTAGAAGTTTATTGAATGACCAGATTCTGTGAT10.9900990099009901No Hit
GAGGTGGATCAACCTGGATAACAACCGGATTCGCAAGATAGACCAGAAGG10.9900990099009901No Hit
GTGATGAATACATTCTCCAGCTATGGAAAGTGGGGTCACACTACTGGGAA10.9900990099009901No Hit
AGGCTATGGAGGCCAAGAAGACCCCTGCCTGGAAAGTTGTCTTAAGACCC10.9900990099009901No Hit
TGCTGATACATCTCTGAGGCCCGAATTCCTTGGTGGAGTCCCAATTTTTC10.9900990099009901No Hit
CCTTGAACCTGCTATTACGTATTGATATGTGAAGAATAAGAAGAGATTTG10.9900990099009901No Hit
GCTGCTGCCTGAATGGTCATAGCCAAAATAGCTAGGGGAAAATTTTACCA10.9900990099009901No Hit
AGTGAATAAACATTGAGTGACTAAACACCACCAAGGTGGTGATCAATCTG10.9900990099009901No Hit
GTAGAGAGATGAAATAAGAAATCAACAAATTCCAACAAGCAAAAGTCCAG10.9900990099009901No Hit
CTTATTTTCAGTTCCAATGGAGTAGAACAAGAAAATAACTCCAAACACTC10.9900990099009901No Hit

[WARN]Adapter Content

Adapter graph

[OK]Kmer Content

No overrepresented Kmers