FastQCFastQC Report
Thu 10 Sep 2020
HHH35BGXF_n01_1793_d02.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHHH35BGXF_n01_1793_d02.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences168
Sequences flagged as poor quality0
Sequence length151
%GC44

[WARN]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTTCAATAAAGTAGTTTGAGTGAATAAAGCAAAAAGCCAACTTGGAAAGA10.5952380952380952No Hit
AGTATATAGTTCCATGGCATTAAGTATATTCGCATTGTTTTGCCACCATA10.5952380952380952No Hit
ATTGAGATGATGTTAGAAATAAACTTTACAAATTCCCTAATTTCATATGA10.5952380952380952No Hit
ACTTAGAGCGTTTACAGATGAAGGAGCAATAGTGGGCGAAATCTCACCAT10.5952380952380952No Hit
CTATAACGCATTGTGCTACTTATAGCTTTTTGGCCTGGCAGTATAAACAA10.5952380952380952No Hit
CAATTTGAATGGATGTCAATACGACTTTACTTTTAATAAAAGTACAAGAG10.5952380952380952No Hit
CAGTTATACCGTCACCCGTACTGGAAATATCATTCCCGATTGGGCTTAGG10.5952380952380952No Hit
GGTAAGCCTGCAAATTTTCAATAAGATCATCTTATAGACCTGCACTCGAA10.5952380952380952No Hit
GAGGCAACCTGGCCCCTGGACCAGTGGCGCTGTCAGGGAGATAGTGTGCA10.5952380952380952No Hit
CAGGGAGCCTGTCGTCCTGTCTGGAGACTGGGGTCTGGAAATGGGCTCTC10.5952380952380952No Hit
GAATCTGGTGATCCAAATGCATTGTTGAAGCACCCTATATTCATCTCCAC10.5952380952380952No Hit
CTACAGTATCGTGAGCACCGTTCGTAAGATTTATAATGGACGGTAGTATT10.5952380952380952No Hit
GGATAATGCAATTATATTACATTATATTTTGGTGTTTAAAGTATCAAACA10.5952380952380952No Hit
ATATGATCCACAGTGGTTTTTGTCAGTATCTCGCGAGTGCGAGATTGCGA10.5952380952380952No Hit
GTTATTTGTGTATTGGGCGTCTTGAACAGGGTAAAAACCGCTCTTTTGAG10.5952380952380952No Hit
CAGACCAGACCCTAAAAGCCTGTTCTCTTCCTCGTGGCGTGCGATAAAGT10.5952380952380952No Hit
GAGTACTACTTTTCTCGATTCAGCTGAAAATCCTTCGAGTTGTGGTCAAG10.5952380952380952No Hit
GACCAGCATTAAGCATCAATGAACTGAGCAATCTTACGAAAGGGGAGAAA10.5952380952380952No Hit
TTGCTAAAGATAACATATTTTCCCGTCTTGTCGTATAAACAAACATACTC10.5952380952380952No Hit
GCGCAATTAGATTAACATTTGCACGTACTCGAAAGTGTTTGCATCGGTTT10.5952380952380952No Hit
ATGTGAGAAAGGAATCAATCAAAATCCTTGAGGAGAACACAGGCAGCAAC10.5952380952380952No Hit
CCCAAGTAAAATGTAGACGCTTAACCGACTGAGCCACCCAGGTGTCCCCC10.5952380952380952No Hit
AATTGATGGCCATCCGAATTCTTTTGGTCGCTGTCTCGCTGTCACTAAGT10.5952380952380952No Hit
GAAAGTGGAGAGAACAATAGCGCCAGAAGTTTGAAGAGATAAGATGGGTA10.5952380952380952No Hit
GGGGATATCTCACAGGCTACTCACTGAGGAGAAAATTGAAGCTCTTGATC10.5952380952380952No Hit
GGGATAGGTAGGTCTGAGAAAGGAGGGCTGCATTTGGAATAATCATTCCA10.5952380952380952No Hit
ACCGATCCCCAGATCTGATCTAGCCTGCTAGGTCAGGCTGTGCAGGGTGT10.5952380952380952No Hit
GATTCATGGATTGCAACTACAACCCACCTTATTATCTGATCAGAATCGAC10.5952380952380952No Hit
TCTTAAAAGTGCCAGCGCAAAATGCAATAAGTACCACATTCCCTTATACA10.5952380952380952No Hit
GTCTGCTTGGAATTCTCGAGTCAACTTTGGGAGGTTTGTCATGTAGGAAA10.5952380952380952No Hit
ATTTTAGTGCATGTGTGAGGAAGGAGTTGAACCAAGATGCATTAAGCAAA10.5952380952380952No Hit
TATGTGCACCACACTTCTTATTTATCCATTCACTTATCCATAAATGGACA10.5952380952380952No Hit
TTGCCAGGCAGAGAGACCCAGGGCAGGCGGAGGCAGACACCCAAGGTCCA10.5952380952380952No Hit
GACTCGAACTGTGTTATCATTCCATTCAAGTCCTCCGATGAGGACCCCAA10.5952380952380952No Hit
TGTGTTCTCTCTTCAATATATTGCTGAATTGAACTTGCTAATTGCCAGGA10.5952380952380952No Hit
ATTGAGGAGTGCCTGATTAATGATCCCTGGGTTTTGCTTAATGCATCTTG10.5952380952380952No Hit
ACTGCTGTATCCTGTTCCTGTTCCATGGCTATATGGGGGATCTCCAGTAT10.5952380952380952No Hit
GAATCAGCATTAAGCATCAATGAACTGAGCAATCTTACGAAAGGGGAGAA10.5952380952380952No Hit
CTAGCATACTTACTGACAGCCAGACAGCGACCAAAAGAATACGGATGGCC10.5952380952380952No Hit
AGCACTTGGTGTACGTAAGAAGGTAATAAGTGATAGAACCTAGAAGAAGC10.5952380952380952No Hit
GTGGCACACACACAGATGGTATGTCGAACGCACCAAACTTTGCCATGACC10.5952380952380952No Hit
TGCCTGGAGGAGACAGACAGTCCTCTGCAGCCCCCAGACTTATCTATAAA10.5952380952380952No Hit
GCTATTCTGTGTAATTCATAACGTATGTCGGAATTCTACATTTAACCATC10.5952380952380952No Hit
GTATGGATAGCAAATAGTAGCATTGCCACAACTATTTTAGTGCATGTGTG10.5952380952380952No Hit
ATTCAGTATTAATTGATGGCCATCCGAATTCTTTTGGTCGCTGTCTGGCT10.5952380952380952No Hit
AAGTTCTGATGTGTTCCTTCTACTAACTTTGGACTTTATTTGTACTTTTC10.5952380952380952No Hit
GCGCAAAATGCAATAAGTACCACATTCCCTTATACTCGAGATCCCCCATA10.5952380952380952No Hit
AATAAAAGCTTCAACCAAGGTATTTTCAGGGAGACCTCCTCGAACAAGGG10.5952380952380952No Hit
GAACAGCAGTTCATATCGGAGGCCAGTTGGAATTTCCAGCATGATGGAGG10.5952380952380952No Hit
CTGTCAGCTTTGTTCTTTTCAAAGAACCAGCTCTTTGCTGATCTGTTATT10.5952380952380952No Hit
TATATTCAATATGGAAAGAATAAAAGAACTAAGAAATTTGAAGTCGCAAT10.5952380952380952No Hit
GTTTGGATACCAAATTGTTGCAATCGCTCAACTATTATAGTGCATGTGTC10.5952380952380952No Hit
CTGGTGATGTCTCCTGACTAACAAATGAAAAGACTGATCTCAAAGGAGGA10.5952380952380952No Hit
GTCTGGCTGTCAGTAAGTATGCTAGAGTCCCGTTTGCGTTTGATTAACAA10.5952380952380952No Hit
CTCCTAATGTCCTATTAGAATCATAAATAGATATGCAGAGGAAGTGAATC10.5952380952380952No Hit
TTTAAACAATTCGACACTAATTGATGGCCATCCGAATTCTTTTGGTCGCT10.5952380952380952No Hit
CTATCAATACATTAGCTTTCTCCACTTTCGTAAGATTGCTCAGTTCATTG10.5952380952380952No Hit
GTTCGGTAGGTGTATCTCTACTCTTTAATGAACAGCTGAAGAGCGATCTG10.5952380952380952No Hit
AGTAAGTATGCTAGAGTCCCGTTTCCGTTTCATTAACAACACTACGTCTC10.5952380952380952No Hit
ATACATGATAGGAGTCCCCATAGAACCCTTTTAATGAACGAGTTGGGTGT10.5952380952380952No Hit
CATATCGACGGCGGTGTTTGGCACCTCGATGTCGGCTCATCACATCCTGG10.5952380952380952No Hit
GCTAATGTATTGATAGGGCAAGGAGACGTAGTGTTGGTAATGAAACGGAA10.5952380952380952No Hit
TCAATGAACTGAGCAATCTTACGAAAGGGGAGAAAGCTAATGTATTGATA10.5952380952380952No Hit
TGCTAGTACTACTTGAAAATCAAAAAACAATAGAAGAGCATGATGCGATC10.5952380952380952No Hit
CTACGTTTGTATCTTTAGGGTAAATACCCAGTAGTGCAATTGCTGGGTCA10.5952380952380952No Hit
GGGGGGTCTTGCTCCACTTCAAGCAATAGTTGTAAGGCTTGCATAAAGGT10.5952380952380952No Hit
TTATTATACTGACCTTATTTTCATCACACTTACCTTTATTATGCAAAATG10.5952380952380952No Hit
GGGCAGTGCTGCTTAAGGCTGGTCAATAAGAGAGGCATTCGTCTGCGTTC10.5952380952380952No Hit
GTGTGTGTGAGTGTGTGTGCGCGCCTGCACAAACCCCAAACAGGACTCGG10.5952380952380952No Hit
CCCTTATACTGGAGATCCCCCATATAGCCATGGAACAGGAACAGGATACA10.5952380952380952No Hit
TTGCAAGGTATGCATTTTGACATAATTCCGGACCTCAAGACGTCTACTGG10.5952380952380952No Hit
GTCCAGGTAGAGCTGGTGAATGGCCGTGGGCACCTTGGGGGGCATCTTCC10.5952380952380952No Hit
AAAATGACTATCGCTTCAGTGCCTGCTTCACGCTACCTAACTGAAATGAC10.5952380952380952No Hit
CTTAGGGACAACCTGGAACCTGGAACCTTTGATCTTGAAGGGCTATATGG10.5952380952380952No Hit
GCCTGATACCCGGCTGAGGTCAAACACGGCCGGGCAGCCTCTCCCCTCGT10.5952380952380952No Hit
ATACATTAGCTTTCTCCCCTTTCGTAAGATTGCTCAGTTCATTGATGCTT10.5952380952380952No Hit
GTCTAGCCAAAGATAAAAAATGGACTTTACCTCAATTACCAATTCTAATT10.5952380952380952No Hit
AATCAGTTGGAGCTCTGATCACACAGGGCCTTTGAAAGGCCGCCTTTCCA10.5952380952380952No Hit
GCATATGGATGCGCTGTTTATCGATCCTGATGTGTGCGGCTGCGGCGTGG10.5952380952380952No Hit
TCAGAAGAAAGCGTCATTTATCTCCGGGATATCCTCGATAGTCTGGGATC10.5952380952380952No Hit
GAAATACTAAAGTTGATGGAGAACTCGCTAAAGAGATAGATACTTCCAAA10.5952380952380952No Hit
GCGTTCATCAAAGTCTTGTAGAGATTGAGGCCAAGATCCTGCCTGACTCT10.5952380952380952No Hit
AACACATCCAAATCTCACCCATGTTCACAACGACCCACACTCCATTCCTG10.5952380952380952No Hit
GATATGGAACAGCATAAACCATCAAAGTACTGAGCATTCTATCGAAGTGT10.5952380952380952No Hit
ACCTTGACATAACTTTGTTAGATGGAGGAGGTAAACAAAAACATAACTTA10.5952380952380952No Hit
CACTAAAATAGTTGTGGCAATGCTACTATTTGCTATCCATACCTGTCTCT10.5952380952380952No Hit
CTGCAATGTCAAACTGAAAAAGGTGTCTAAAACATAACAATCCAATTCAT10.5952380952380952No Hit
GTATAAAAGTGCTTTATAAACTAGGAGATACTGCCAAATTATGAAAATGA10.5952380952380952No Hit
GAGCATAATGGAATGCTGTGTGCACCAAGCCTGGGACATCCCCTCATTCT10.5952380952380952No Hit
GCTGAAACGAGAAAGTTCTTATCTCTTGCTCCACTTCAAGCAATAGTTGT10.5952380952380952No Hit
GGCCAGAGAACTACAGCCCGAGTGGTTGCAGTTGGGAGGAAAACAGCTTT10.5952380952380952No Hit
CTGTATAGAAGCCATATAGAAGAATTGATAACTGTCTTTAAGGTCGTCTG10.5952380952380952No Hit
TATCAATACATTAGCTTTCTCCCCTTTCGTAAGATTGCTCAGTTCATTGA10.5952380952380952No Hit
TAGTAGCATTGCCACAACTATTTTAGTGCATGTGTGAGGAAGGAGTTGAA10.5952380952380952No Hit
GCCCTGGCCGGCCGCGCTCTGCAATGGGGGAACAGAGCTTCCAGATCTCA10.5952380952380952No Hit
TGCATTATATGCCCATACGTCTTGTATTTGGTCATCAATCTTATTATTGA10.5952380952380952No Hit
CTTCCAGGGATACTAACATTGTTCCATGCAGTGAGGAAAATCTCCCAGCT10.5952380952380952No Hit
GTCCCTAAGTGCTTGAACAATGAGTAGTAGTTTTCTCGATTCAGCTGAAA10.5952380952380952No Hit
CAAAAGATATGGACCAGCATTAAGCATCAATGAACTGAGCAATCTTACGA10.5952380952380952No Hit
GCCCCAGACATACGGCAGGTTGTCCAAAGAGACATGGGGCTTCGAGCTGG10.5952380952380952No Hit
ATCAATACATTAGCTTTCTCCCCTTTCGTAAGATTGCTCAGTTCATTGAT10.5952380952380952No Hit
CTTATGGACCAGCATTAAGCATCAATGAACTGAGCAATCTTACGAAAGGG10.5952380952380952No Hit
ATACAAGTGATGTCCTTACAAGAAGATGAAGAGATTACAGAGGTTTCTTT10.5952380952380952No Hit
GCAGAAGAACAGGTCGGGGGGGCAGTGATTTGGTAGCGGCGCTATCAAAT10.5952380952380952No Hit
ATGAATGGTAAAATTATGCAAAGTGGCAAATAATACGAGAAAATAAATAT10.5952380952380952No Hit
GACACTAATTGATGGCCATCCGAATTCTTTTGGTCGCTGTCTGGCTGTCA10.5952380952380952No Hit
GCTTTTAAAGAGGTAATTAAGTTAAAATGAGGTCATTGGGTGGGCCCTAA10.5952380952380952No Hit
GGATTGCTCCTTCTTCTGGAAACGCTCGAAGTCCTATCAGCGCTGCAAGT10.5952380952380952No Hit
TTTCTTAAAAGTGCCAGCGCAAAATGCAATAAGTACCACATTCCCTTATA10.5952380952380952No Hit
GAGTATGCCCTATGAGGGCTAAGGTTCCAAAACAATGAGCACAGCGCCTC10.5952380952380952No Hit
TTTCTTGCCAGCGCAAAATGCAATAAGTACCACATTCCCTTATACTGGAG10.5952380952380952No Hit
AAACAAGGCATTTTTTCATGAAGGACAAGCCAAATTCACTTCCCTTGCCG10.5952380952380952No Hit
CTCATGGTTTTACCATTGATTTAGCCACCACACGGGTAGCTGCGGTCTCT10.5952380952380952No Hit
TCATTAATCAGGCACTCCTCAATTGCTCCATAAAGCCCTTCTAGATCTAA10.5952380952380952No Hit
AACCAATCCCTTGACATTTCCTCAAGAGTCATTTCAGTTAGGTAGCGTGA10.5952380952380952No Hit
TCCTTGCCCTATCAATACATTAGCTTTCTCCCCTTTCGTAAGATTGCTCA10.5952380952380952No Hit
CCTTTGCTCATATACAGATTTGCAGATGGTCCGTATAACCTTTTTGAATA10.5952380952380952No Hit
GCGCAAGATAGACCAGACGGTTCGGGAGACACGGCCCAGGCTGCTATTCC10.5952380952380952No Hit
TGGTGGTACCATCCATCTTAATGGGGAATTCATGGTGGGAGAGATCATCT10.5952380952380952No Hit
AGCAGGCTCCCTGCTGAGCAGAGAGCCTGATGTGGGGCTCCATCCCAGGA10.5952380952380952No Hit
GTGTAGGGGTAGGGAAGGAGGGGCAAGCGCACTGTGCCAGCTCTCCTGCT10.5952380952380952No Hit
GTTTAAAACAGAACGCAGAAGAGGTCTGCAAAACGCGATATTGCCGGGAG10.5952380952380952No Hit
CCCTTTACCTTGTAACTGGCTGGGGACATGTTAGTGGCTCAGTTGGTTAA10.5952380952380952No Hit
CCACACCCCTCACCTCCATAGGCTTCTCAGCCCCACTATTTCTGGATAGC10.5952380952380952No Hit
AAATCACACTAAAGTTAGATTTCAATATTATGGTAAAACACATTACTTAC10.5952380952380952No Hit
GAATATGGGGAAGACCCGAAAATTGAAACAAATAAGTTCGCTGCAATGGA10.5952380952380952No Hit
GTTCTAGTCTCTCCTTTGACAAACATACCTTCCAAAGGTCTTAAAGGCCA10.5952380952380952No Hit
GATGAGCAGGGAGCCCAATGCAGGGCTCGATACCAGCCCCTTGGGTTTAT10.5952380952380952No Hit
CACCTATACCGAGCAAACAAATTTGTACATAAGAAACGACACAACAACAA10.5952380952380952No Hit
CATTTGAATGGATGTCAATCCGACTTTACTTTTCTTAAAAGTGCCAGCGC10.5952380952380952No Hit
AAAAAAATCTTTAATATAAATATGATCGAAAGAAAATATAGCAAATGTTA10.5952380952380952No Hit
CATATTTTTTGAATTTGGTTTCATTAAATGTAGTAAGTAATTTGAACACC10.5952380952380952No Hit
GATTAATGATCCCTGGGTTTTGCTTAATGCATCTTGGTTCAACTCCTTCC10.5952380952380952No Hit
AGCTTACATCATGTGGTATTATTGGCCAAGGAGAGTTTTAGGAACGAGAT10.5952380952380952No Hit
GAACAACTTTTTTTTTTTTTTTTTTAATTTGGGATAAAGGGCTGCCTGTG10.5952380952380952No Hit
CCCATGGTTTCACCTGTGAATTCTACGAATCATCCACAGAAAAAAATGAA10.5952380952380952No Hit
GAAAAAGCCACACCCCATTCCTCTCACATGGAACAACACACATAACTGTT10.5952380952380952No Hit
GGAAGAGACCGAGCAATGGCCTGGACAGTGGTGAATAGCATCTGCAACAC10.5952380952380952No Hit
CCATAATTAAGAAGTACACATCAGGAAGACAGGAGAAGAATCCCGCTGAG10.5952380952380952No Hit
TTCCATCACTGATTAAAAAAATTAAATATGTAAGAAACATATGCAAAAAC10.5952380952380952No Hit
ACACATTCATGGATTCCCAAGAGAAATCGCTCCATTCTCAACACTAGCCA10.5952380952380952No Hit
ATCTAATCCAGAACATTTGGTGGTTGCGCAATAATTTTCATAATTGGGAA10.5952380952380952No Hit
TTATAGTGTAGATTGTAGTTATGTGAGCTCAGGACTTCTTGGCGACGCAC10.5952380952380952No Hit
GAGTGTAAATTTAACGTAAAGTATATCAAGTGCTTATACCAATTACGCAA10.5952380952380952No Hit
GAGCAATCTTACGAAAGGGGAGAAAGCTAATGTATTGATACTGTCTCTTA10.5952380952380952No Hit
ATATAGCCCTTCAAGATAAAAGGTTCCAGGTTCCAGGTTGTCACTAAGTG10.5952380952380952No Hit
GCTTTAATCCAATGATTGTCGAGCTTGCGGAAAAGACAATGAAGGAATAT10.5952380952380952No Hit
CCCGCCAGCAGTGCTGGGACTGGAGCGCGACCAGCGACTCACCTCGGCGC10.5952380952380952No Hit
GCCTTACATATGACCTAAGTTGGAGAACGTTCTAGGGGCACTTGAGAGGA10.5952380952380952No Hit
TTATCTCTCTTTATCTCACCTTCTGCCCCAATTTAACCATCCTCCAAGTC10.5952380952380952No Hit
GTTCCAGTGCAGGTCTAAAAGATGATCTTATTGAAAATTTGCAGGCTTAC10.5952380952380952No Hit
GAAATGAACGGTGCTTCTTGGTAGCTGCAAACCCAGAGACCAGCCTCCCT10.5952380952380952No Hit
GAACAATGAGTAGTAGTTTTCTCGATTCAGCTGAAAATCCTTCGAGTTGT10.5952380952380952No Hit
AAATGCATTTGAAGAAAAGACGATCAAGAATCCACAATATCAAGTGCAAT10.5952380952380952No Hit
GACCACAGCCCTGTGGAAACCGAGAGAACAGGGCGTGAGCAGAAAACAGA10.5952380952380952No Hit
CCTGGAACCTGGAACCTTTGATCTTGAAGGGCTATATGGAGCAATTGAGG10.5952380952380952No Hit
ATATAGCCCTTCAAGATCAAAGGTTCCAGGTTCCAGGTTGTCCCTAAGTG10.5952380952380952No Hit
GGTAATCTTCATCCATCACCTCCCACTTCAAGCAAACTTAAGGAAGGTGA10.5952380952380952No Hit
GGCTTAACCACAGGGAGACACAGAGATCTGTCATGAAGATTCCTGGCTTG10.5952380952380952No Hit
TTTTTAAACAATTCGACTCTAATTGATGGCCATCCGAATTCTTTTGGTCG10.5952380952380952No Hit
AAAGCAGGCAAACCATTTGAATGGATCTCAATCAGACTTTACTTTTCTTA10.5952380952380952No Hit
GAATATTGCTGGGTTCTGTTGACTTTTTCCATTGTGTATCAGGTTACTGT10.5952380952380952No Hit
GGCCGCCGGCTGGTGTATCTTTACTCCGTCAGGACGAAACACCCATGAAT10.5952380952380952No Hit
AATCCGGTTGGGTCAGCCCTCATATTATATTCCTTTATGTCCAGAAGATG10.5952380952380952No Hit
CTCCAAAACAGAAACGGAAAGTGGAGAGAACAATTGAGCCAGAAGTTTGA10.5952380952380952No Hit
GAAACAAGGTACTTTTTTGGACAGTATGGATAGCAAATAGTAGCATTGCC10.5952380952380952No Hit
GAATAAAAGAACTAAGAAATTTGATGTCGCAATCTCGCACTCGCGAGATA10.5952380952380952No Hit
GCTCAGGTGCCTACATTTGGAGCCCTCTAAAGCTGGCAAAGGCCTTAAGA10.5952380952380952No Hit

[FAIL]Adapter Content

Adapter graph

[OK]Kmer Content

No overrepresented Kmers