HHGHNAFX2_n02_DS2259-1.dk.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	HHGHNAFX2_n02_DS2259-1.dk.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	5666008
Sequences flagged as poor quality	0
Sequence length	76
%GC	40

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
AGATCGGAAGAGCGTCGTGTAGGGAAAGAGTGTAGATCTCGGTGGTCGCC	76781	1.3551163358752758	Illumina Single End PCR Primer 1 (100% over 50bp)
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	18391	0.32458478703171617	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
AAAGGGG	12845	42.556263	66
CGCCGTA	15960	41.508236	47
AGGGGGG	13395	41.38221	68
CCGTATC	15370	41.165142	49
AAGGGGG	13450	40.74466	67
TCGCCGT	16340	40.52187	46
GGTCGCC	17015	40.12748	44
GTCGCCG	16670	40.09723	45
GCCGTAT	16505	40.09486	48
CGTATCA	15915	39.843422	50
CTCGGTG	16370	38.69528	38
GTGGTCG	17720	38.511574	42
ATCTCGG	16430	38.25576	36
GTGACTG	2690	38.08286	1
GTATCAT	16215	37.897682	51
TCTCGGT	16625	37.764946	37
TGACTGG	2750	37.591442	2
GATCTCG	16585	37.455097	35
TGGTCGC	18240	37.35577	43
GGTGGTC	18415	37.077442	41