HHGHNAFX2_n02_DS2258-1.dk.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	HHGHNAFX2_n02_DS2258-1.dk.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	6998578
Sequences flagged as poor quality	0
Sequence length	76
%GC	40

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
AGATCGGAAGAGCGTCGTGTAGGGAAAGAGTGTAGATCTCGGTGGTCGCC	44577	0.6369436762725228	Illumina Single End PCR Primer 1 (100% over 50bp)
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	19062	0.27236961565620904	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CGCCGTA	9105	47.273468	47
CCGTATC	9080	46.440796	49
GGTCGCC	10395	46.32354	44
TCGCCGT	9140	46.09831	46
GCCGTAT	10110	45.101257	48
GTCGCCG	10755	44.837715	45
ATCTCGG	10780	44.70127	36
CTCGGTG	11010	43.958477	38
TCTCGGT	11130	42.886517	37
GATCTCG	11290	42.341034	35
CGTATCA	10410	42.22186	50
GTGGTCG	11645	42.10266	42
TGGTCGC	10900	41.64101	43
AGATCTC	11840	39.75349	34
TCGGTGG	13385	39.583035	39
GGTGGTC	12380	39.57476	41
TAGATCT	12570	38.27974	33
GTAGGGA	14695	37.60496	19
CGGTGGT	13875	37.5801	40
GTATCAT	11550	36.99434	51