HHGHNAFX2_n02_DS2227-1.dk.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	HHGHNAFX2_n02_DS2227-1.dk.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	7651447
Sequences flagged as poor quality	0
Sequence length	76
%GC	40

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
AGATCGGAAGAGCGTCGTGTAGGGAAAGAGTGTAGATCTCGGTGGTCGCC	166735	2.1791303004516664	Illumina Single End PCR Primer 1 (100% over 50bp)
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	30632	0.40034257572456555	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GTGACTG	5115	47.451263	1
TGACTGG	5350	44.930035	2
AAAGGGG	24560	43.90143	66
GACTGGA	5755	43.884815	3
AGGGGGG	25120	43.422848	68
AAGGGGG	24975	43.240864	67
CCGTATC	30220	43.06639	49
CGCCGTA	31090	42.941833	47
TCGCCGT	31230	42.480404	46
CGTATCA	30890	42.223198	50
GCCGTAT	32290	41.865917	48
GTCGCCG	32445	41.483093	45
GGTCGCC	33045	41.460606	44
GTATCAT	31000	40.267426	51
TGGTCGC	33955	40.174507	43
GTGGTCG	34140	40.059315	42
CTCGGTG	31750	39.724308	38
ATCTCGG	31865	39.38326	36
TCTCGGT	32120	38.96139	37
GATCTCG	31960	38.8063	35