HHGHNAFX2_n02_DS2223-1.dk.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	HHGHNAFX2_n02_DS2223-1.dk.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	9220147
Sequences flagged as poor quality	0
Sequence length	76
%GC	40

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
AGATCGGAAGAGCGTCGTGTAGGGAAAGAGTGTAGATCTCGGTGGTCGCC	53341	0.578526567960359	Illumina Single End PCR Primer 1 (100% over 50bp)
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	22620	0.24533231411603307	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CGCCGTA	10760	40.783974	47
TCGCCGT	11095	39.615417	46
GGTCGCC	11515	39.50702	44
GTCGCCG	11525	38.865887	45
CCGTATC	11045	38.527195	49
GTGGTCG	12085	37.701954	42
GCCGTAT	11630	37.643	48
CTCGGTG	11350	37.215	38
ATCTCGG	11600	36.352615	36
AAAGGGG	10825	35.786697	66
TCTCGGT	11815	35.572624	37
GATCTCG	12000	34.79072	35
CGTATCA	12285	34.666706	50
TGGTCGC	13095	34.66006	43
GGTGGTC	13190	34.62286	41
TCGGTGG	12940	34.345993	39
AGGGGGG	11545	34.19067	68
CGGTGGT	14130	31.898548	40
AGATCTC	13205	31.853949	34
AAGGGGG	12160	31.770784	67