HHG5CBGXB_n02_MT_30785.TR3.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	HHG5CBGXB_n02_MT_30785.TR3.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	22697381
Sequences flagged as poor quality	0
Sequence length	151
%GC	58

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGATCCCGAGGCCTCTCCAGTCCGCCGAGGGCGCACCACCGGCCCGTCT	43835	0.19312800890992665	No Hit
CCCCACCATGCCGTAATGTACCGCGTTTTGATCCTGCTTAGGGCAGGTGG	39326	0.17326228078913597	No Hit
GCGAGTTGGTCCCACGCCTTCCCATCCCGAACAGGACCGTGAAACGACTC	37899	0.16697521180967972	No Hit
GTGGGATCCCGAGGCCTCTCCAGTCCGCCGAGGGCGCACCACCGGCCCGT	35844	0.1579213037839035	No Hit
CGAACGCCGGGTTAAGGCGCCCGATGCCGACGCTCATCAGACCCCAGAAA	32119	0.141509718676353	No Hit
GTGATATCGCAGTTTTGAGCCAACACATTTACTTCGGGAGTCCGAACTCT	31567	0.1390777200241737	No Hit
GCGGTGACCTACTTTCACATGGAAGAACCACACTATCATCGGCGCTGAGT	29398	0.12952155140718657	No Hit
CGGTGACCTACTTTCACATGGAAGAACCACACTATCATCGGCGCTGAGTC	27034	0.11910625283154914	No Hit
GCCCGACGCTCCAGCGCCATCCATTTTCAGGGCTAGTTGATTCGGCAGGT	24326	0.10717536089295943	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
ATCACAC	14410	45.56761	145
CTTACAT	8625	41.02185	1
ATGCCGT	31585	39.89606	8
GGCCATA	9075	37.20865	2
CCATAGC	8985	35.878677	4
TTACATT	10075	34.881992	2
TACATTC	10490	33.909443	3
TTGGTCC	18485	33.590034	6
CCATGCC	37935	33.041145	6
CCACCAT	29740	32.885723	3
ACCATGC	32530	32.849754	5
GTAGATG	14715	32.493523	145
ATTCAGT	12580	31.964022	6
CCAAGTG	22880	31.100458	8
TGTGTAT	5880	30.725126	145
GTCCCAC	20650	30.670162	9
ACTCGAA	8455	30.589952	5
TAGACCT	11245	30.284273	7
TGCGTGT	13095	30.212852	2
CTCTATT	10315	29.824163	145