HH7JLAFX2_n01_undetermined.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	HH7JLAFX2_n01_undetermined.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	12168469
Sequences flagged as poor quality	0
Sequence length	151
%GC	47

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGATCGATACAGGTATTCTTGTGGAAAGGACGAAACACCGCCAGTAGGTC	751630	6.176865799633462	No Hit
ACGATCGATAGGTAAGGTCTTGTGGAAAGGACGAAACACCGCCAGTAGGT	690079	5.671042100694837	No Hit
GATCGATAACGCATTTCTTGTGGAAAGGACGAAACACCGCCAGTAGGTCC	638503	5.247192559721359	No Hit
ATCGATTCCTTGGTTCTTGTGGAAAGGACGAAACACCGCCAGTAGGTCCA	615442	5.057678168058775	No Hit
ATACTGTATCTCTTGTGGAAAGGACGAAACACCGCCAGTAGGTCCACTAT	557728	4.583386784319375	No Hit
TAACAATGGTCTTGTGGAAAGGACGAAACACCGCCAGTAGGTCCACTATG	534546	4.3928780194123025	No Hit
GATAGGTCGCATCTTGTGGAAAGGACGAAACACCGCCAGTAGGTCCACTA	321149	2.639189860285628	No Hit
TAACAATGGTCTTGTGGAAAGGACGAAACACCGCCACTAGGTCCACTATG	147309	1.210579572500041	No Hit
AACAATGGTCTTGTGGAAAGGACGAAACACCGCCAGTAGGTCCACTATGA	17180	0.14118456479611363	No Hit
TACAATGGTCTTGTGGAAAGGACGAAACACCGCCAGTAGGTCCACTATGA	13473	0.11072058448766232	No Hit
AAAAAAATAGATTTATTAAAGTACAAAACACCAAAAAAAGCAACAATATC	12724	0.10456533192466529	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
ACGATCG	78665	142.38719	1
ATCGATT	68745	142.14388	1
TCGATTC	69075	141.46245	2
CGATTCC	69360	140.84933	3
GATTCCT	70055	139.35915	4
GATAACG	74520	139.02026	5
ACTGTAT	63585	138.85385	3
ATTCCTT	70520	138.52222	5
AACAATG	79320	138.04329	2
CGATAGG	81835	137.70392	6
CTGTATC	64210	137.68239	4
ATACAGG	86255	137.58403	7
CGATACA	86315	137.48141	5
ACGCATT	75745	137.40968	9
AACGCAT	75775	137.40294	8
CGCATCT	38345	137.3743	8
TCGCATC	38330	137.29614	7
GATACAG	86425	137.25626	6
TAACGCA	75830	137.22707	7
GCATCTT	38410	137.16064	9