HH7JLAFX2_n01_0909_CD8_presort.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	HH7JLAFX2_n01_0909_CD8_presort.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	7604024
Sequences flagged as poor quality	0
Sequence length	151
%GC	48

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
TAACAATGGTCTTGTGGAAAGGACGAAACACCGCCAGTAGGTCCACTATG	5447957	71.64571021869473	No Hit
TAACAATGGTCTTGTGGAAAGGACGAAACACCGCCACTAGGTCCACTATG	1615236	21.241858258206445	No Hit
TAACAATGGTCTTGTGGAAAGGACGAAACACCGCCACGAGGTCCACTATG	24119	0.31718732081855605	No Hit
TAACAATGGTCTTTTGGAAAGGACGAAACACCGCCAGTAGGTCCACTATG	17436	0.22929964450401524	No Hit
TAACAATGGTCTTGTGGAAAGGACGAAACACCTCCAGTAGGTCCACTATG	16666	0.21917342712227103	No Hit
TAACAATGGTCTTGTGGAAAGGACGAAACACCACCAGTAGGTCCACTATG	11760	0.15465495637572949	No Hit
TAACAATGGTCTTGTGGAAAGGACGAAACACCGCCTGTAGGTCCACTATG	11410	0.15005213029311848	No Hit
TAACAATGGTCTTGTGGAAAGGACGAAACACCGCAGTAGGTCCACTATGA	9696	0.12751143341998922	No Hit
TAACAATGGTCTTGTGGAAAGGACGAAACACCGCCAGTAGGTCACTATGA	8611	0.11324267256389513	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
AATGGTC	755425	144.89676	5
CAATGGT	754730	144.87547	4
AACAATG	755670	144.85939	2
ACAATGG	754545	144.85622	3
TAACAAT	755535	144.84567	1
ATGGTCT	756225	144.7991	6
GGTCTTG	751620	144.7705	8
TGGTCTT	756300	144.68938	7
GTCTTGT	753490	144.40736	9
AACTCCA	729290	133.16711	145
ACTCCAG	60195	122.17289	145
AACTCCC	3330	101.22596	145
GGTCTTT	4865	99.982254	8
AACTCAG	4405	79.48486	145
CAATGAT	1635	77.62686	4
AACTCAA	2710	73.56083	145
GTCTTTT	6205	73.25022	9
CTCCAGT	10335	72.876625	145
AACCCAG	2590	70.251755	145
CAATAGT	1315	68.38923	4