FastQCFastQC Report
Sat 18 Aug 2018
HH2YKBGX7_n01_0ars.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHH2YKBGX7_n01_0ars.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences14
Sequences flagged as poor quality0
Sequence length76
%GC37

[FAIL]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CCGGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA17.142857142857142No Hit
CGGGGAAAAAAAAAAAAAAAAAAAGTAAGGAAGAGCAAAGGACAGAACTC17.142857142857142No Hit
GGGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGGAAGGGAACACAAC17.142857142857142No Hit
GGGGAGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA17.142857142857142No Hit
CCGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA17.142857142857142No Hit
CCCCCAAAAAAAAAAAAAAACCAAAAAAAAAAAAAAAGAACGGAATACCA17.142857142857142No Hit
CCGGGGGAAAAAAAAAAAAAGATCGGAAGAGCACACGTCTGAACTCCAGT17.142857142857142Illumina Multiplexing PCR Primer 2.01 (100% over 31bp)
CGGGGAGAGAAAAAAAAAAAAAAAGAGCGGAAGCGCACAAGTCAGAACAC17.142857142857142No Hit
GGGGGGAAAAAAAAAAAAAAAGAAAGGAAGAGAAAACAAATGAACTCCAG17.142857142857142No Hit
CGGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACAAACGCCGGACCCC17.142857142857142No Hit
CGGGGGAGAAAAAAAAAAAAAAAAAGAACGGAAGAGCACACGACTGAACT17.142857142857142No Hit
GGGAGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGCCAA17.142857142857142No Hit
TCGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA17.142857142857142No Hit
GGGGAAAAAAAAGAAAAAAAAAAAAAAGAGGGGAAGAGCACACGTCAGAA17.142857142857142No Hit

[WARN]Adapter Content

Adapter graph

[OK]Kmer Content

No overrepresented Kmers

Produced by FastQC (version 0.11.2)