HH2TCBGX7_n01_5000_062_2_dr.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	HH2TCBGX7_n01_5000_062_2_dr.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	13316959
Sequences flagged as poor quality	0
Sequence length	76
%GC	53

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GATCGGAAGAGCACACGTCTGAACTCCAGTCACCACTCAATCTCGTATGC	20621	0.1548476645456369	TruSeq Adapter, Index 7 (97% over 35bp)
GCCGTTCTTAGTTGGTGGAGCGATTTGTCTGGTTAATTCCGTTAACGAAC	17518	0.1315465490281978	No Hit
GCGATTTGTCTGGTTAATTCCGTTAACGAACGAGACCTCAGCCTGCTAAC	14039	0.10542196608099492	No Hit
GCCAGTAGTCATATGCTTGTCTCAAAGATTAAGCCATGCATGTGCAAGTA	13852	0.10401774158800069	No Hit
CCCGACTGTCCCTATTAATCATTACTCCGATCCCGAAGGCCAACACAATA	13612	0.10221552833495995	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TATGCCG	3090	51.98832	46
TCGTATG	3275	49.371433	43
CTCGTAT	3000	48.997406	42
GTATGCC	3425	47.311897	45
CGTATGC	3600	45.303326	44
ACGTCTG	3905	43.5587	15
CACGTCT	4020	42.31262	14
CAGTCAC	3960	42.157967	27
ACTCAAT	3855	41.944244	35
AGTCACC	3990	41.49012	28
ATGCCGT	4090	39.70569	47
ACACGTC	4290	39.567856	13
CCACTCA	4250	38.3753	33
GTCTGAA	4520	37.862896	17
CTCAATC	4040	36.2984	36
GCCGTCT	4830	33.623047	49
AGCACAC	5075	33.309956	10
CCGTCTT	5005	32.377487	50
CTGAACT	5310	32.29608	19
CACCACT	5285	31.256975	31