HH2TCBGX7_n01_2500_250_1_dr.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	HH2TCBGX7_n01_2500_250_1_dr.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	13081220
Sequences flagged as poor quality	0
Sequence length	76
%GC	53

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GATCGGAAGAGCACACGTCTGAACTCCAGTCACTATAATATCTCGTATGC	62549	0.4781587650081567	TruSeq Adapter, Index 9 (97% over 36bp)
GCCGTTCTTAGTTGGTGGAGCGATTTGTCTGGTTAATTCCGTTAACGAAC	21130	0.16152927632132172	No Hit
GCCAGTAGTCATATGCTTGTCTCAAAGATTAAGCCATGCATGTGCAAGTA	17733	0.13556075044988158	No Hit
GCGATTTGTCTGGTTAATTCCGTTAACGAACGAGACCTCAGCCTGCTAAC	16810	0.1285048336470146	No Hit
CCGGAACCCAAAGACTTTGATTTCTCATAAGGTGCCGGCGGAGTCCTATA	16178	0.1236734799965141	No Hit
CCCGACTGTCCCTATTAATCATTACTCCGATCCCGAAGGCCAACACAATA	15240	0.11650289498991685	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TATGCCG	7945	59.027695	46
TCGTATG	8235	57.203556	43
CTCGTAT	8045	57.162457	42
GTATGCC	8390	56.188686	45
CGTATGC	8520	55.49544	44
CTATAAT	8745	55.14963	33
ACGTCTG	9015	54.04224	15
AGTCACT	8910	53.85338	28
CACGTCT	9090	53.635056	14
TAATATC	8785	53.18523	36
CACTATA	9060	53.03801	31
TCACTAT	9230	52.32657	30
CAGTCAC	9280	51.93249	27
TATAATA	9410	51.28923	34
ACACGTC	9575	50.95504	13
TATCTCG	9160	50.242382	39
GTCTGAA	9895	49.270298	17
ATGCCGT	9610	49.056408	47
ATAATAT	10330	46.75542	35
CCGTCTT	10075	46.481045	50