HH2TCBGX7_n01_1250_125_2_dr.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	HH2TCBGX7_n01_1250_125_2_dr.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	12680201
Sequences flagged as poor quality	0
Sequence length	76
%GC	53

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GATCGGAAGAGCACACGTCTGAACTCCAGTCACCTAGCTATCTCGTATGC	32480	0.25614735917829695	TruSeq Adapter, Index 3 (97% over 37bp)
GCCGTTCTTAGTTGGTGGAGCGATTTGTCTGGTTAATTCCGTTAACGAAC	16615	0.1310310459589718	No Hit
GCCAGTAGTCATATGCTTGTCTCAAAGATTAAGCCATGCATGTGCAAGTA	14170	0.11174901722772375	No Hit
CCGGAACCCAAAGACTTTGATTTCTCATAAGGTGCCGGCGGAGTCCTATA	13477	0.10628380417629026	No Hit
CCCGACTGTCCCTATTAATCATTACTCCGATCCCGAAGGCCAACACAATA	12986	0.10241162580940161	No Hit
GCGATTTGTCTGGTTAATTCCGTTAACGAACGAGACCTCAGCCTGCTAAC	12893	0.10167819894968542	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TATGCCG	4770	54.58785	46
CGTATGC	5035	51.992428	44
CTCGTAT	4845	51.359077	42
TCGTATG	5165	50.683815	43
GTATGCC	5220	49.680866	45
ACGTCTG	5490	48.961643	15
CACGTCT	5730	46.78873	14
CAGTCAC	5755	45.30708	27
AGTCACC	5865	44.39766	28
ACACGTC	6165	43.601227	13
TCACCTA	6000	43.51417	30
CACCTAG	6165	42.29279	31
CTATCTC	5770	42.156956	38
GCTATCT	5825	41.759075	37
ATGCCGT	6390	40.69455	47
TATCTCG	6035	40.188087	39
GTCTGAA	6720	39.997234	17
ACCTAGC	6875	38.07932	32
CCTAGCT	7175	36.82832	33
CCGTCTT	7165	35.85463	50