HH2TCBGX7_n01_1250_062_1_dr.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	HH2TCBGX7_n01_1250_062_1_dr.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	11019689
Sequences flagged as poor quality	0
Sequence length	76
%GC	54

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GATCGGAAGAGCACACGTCTGAACTCCAGTCACACTGATATATCTCGTAT	23092	0.20955219335137315	TruSeq Adapter, Index 25 (97% over 44bp)
GCCGTTCTTAGTTGGTGGAGCGATTTGTCTGGTTAATTCCGTTAACGAAC	16298	0.14789891075873374	No Hit
GCGATTTGTCTGGTTAATTCCGTTAACGAACGAGACCTCAGCCTGCTAAC	13613	0.12353343184186051	No Hit
GCCAGTAGTCATATGCTTGTCTCAAAGATTAAGCCATGCATGTGCAAGTA	12792	0.11608313083971789	No Hit
CCCGACTGTCCCTATTAATCATTACTCCGATCCCGAAGGCCAACACAATA	11561	0.1049122166696356	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TATGCCG	3305	55.06672	48
TCGTATG	3460	53.406906	45
CTCGTAT	3355	52.886303	44
GTATGCC	3525	51.925907	47
CGTATGC	3910	46.633774	46
AGTCACA	4080	45.89431	28
ACGTCTG	4095	45.81125	15
CACGTCT	4175	45.351967	14
CAGTCAC	4135	45.19943	27
TGATATA	4160	45.09361	36
TATATCT	3995	44.852314	39
ATGCCGT	4130	43.814266	49
ACTGATA	4335	43.757027	34
GTCACAC	4345	43.175194	29
ACACGTC	4435	42.772144	13
GTCTGAA	4570	40.97124	17
GCCGTCT	4465	40.762695	51
GATATAT	4645	40.61127	37
CTGATAT	4760	39.335476	35
ATATATC	4610	39.097576	38