HH2TCBGX7_n01_0625_062_2_dr.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	HH2TCBGX7_n01_0625_062_2_dr.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	8691846
Sequences flagged as poor quality	0
Sequence length	76
%GC	53

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GATCGGAAGAGCACACGTCTGAACTCCAGTCACCAAAAGATCTCGTATGC	29232	0.33631520852992564	TruSeq Adapter, Index 7 (97% over 37bp)
GCCGTTCTTAGTTGGTGGAGCGATTTGTCTGGTTAATTCCGTTAACGAAC	14491	0.16671947478130653	No Hit
GCGATTTGTCTGGTTAATTCCGTTAACGAACGAGACCTCAGCCTGCTAAC	11891	0.13680638152125565	No Hit
GCCAGTAGTCATATGCTTGTCTCAAAGATTAAGCCATGCATGTGCAAGTA	11543	0.13280262903875656	No Hit
CCGGAACCCAAAGACTTTGATTTCTCATAAGGTGCCGGCGGAGTCCTATA	10736	0.12351806509227155	No Hit
CCCGACTGTCCCTATTAATCATTACTCCGATCCCGAAGGCCAACACAATA	10651	0.12254013704338525	No Hit
CCGACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCA	9058	0.10421261490366948	No Hit
GAACAATCCAACACTTGGTGAATTCTGCTTCACAATGATAGGAAGAGCCG	8757	0.10074959910702515	No Hit
CTTGCTTTGAGCACTCTAATTTCTTCAAAGTAACGGCGCCGGAGGCACGA	8698	0.10007080199073938	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TATGCCG	4110	60.37217	46
TCGTATG	4250	58.137066	43
GTATGCC	4290	57.594666	45
CTCGTAT	4065	57.51131	42
CGTATGC	4430	55.932842	44
AGTCACC	4660	53.624363	28
CAGTCAC	4660	53.24915	27
CACGTCT	4760	52.79221	14
ACGTCTG	4760	52.71868	15
ATGCCGT	4690	52.683147	47
ACACGTC	4875	51.475357	13
GTCTGAA	4950	50.692806	17
GCCGTCT	5025	48.824944	49
AGCACAC	5425	46.96847	10
CCGTCTT	5295	46.467754	50
TGCCGTC	5445	45.507736	48
AGATCTC	5025	45.062527	38
AAAGATC	5115	44.816765	36
CTGAACT	5690	44.46911	19
TGAACTC	5780	43.837986	20