HH2MLBGX7_n02_undetermined.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	HH2MLBGX7_n02_undetermined.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	32613213
Sequences flagged as poor quality	0
Sequence length	50
%GC	49

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	2151184	6.596050502598441	No Hit
AAGCAGTGGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT	66194	0.2029668159343883	No Hit
GCATAGCTCTTAAACCATATAGGTCCTTGGGAACCCCCCATATAAGAAAA	38068	0.11672569642248987	No Hit
GCATAGCTCTTAAACCATATAGGTCCTTGGGAACCCCCCATATAAGAAAC	35822	0.1098389171284657	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GCATAGC	62905	43.185574	1
TGTCCGA	30170	43.085484	6
CATAGCT	63090	42.690212	2
TTGTCCG	30195	42.662827	5
ATAGCTC	63390	42.61884	3
CCGATTC	29835	42.49624	9
TAGCTCT	62815	42.42724	4
TCCGATT	30480	41.869877	8
GATTCCC	30655	41.701614	11
AGTTGTC	31540	41.646843	3
CGATTCC	30680	41.293255	10
GGGAACC	20480	40.603363	29
TAGGTCC	22095	40.450844	20
GTTGTCC	31835	40.434856	4
TGTACCC	20845	40.425945	10
GCAGTTG	33125	40.225418	1
ATATAGG	23390	40.024384	17
TGGGAAC	20980	39.980766	28
CATATAG	23390	39.865406	16
GGAACCC	20925	39.509857	30