Basic Statistics
Measure | Value |
---|---|
Filename | HH2MLBGX7_n02_ADT2.fastq.gz |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 25317675 |
Sequences flagged as poor quality | 0 |
Sequence length | 50 |
%GC | 43 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG | 128729 | 0.5084550615330989 | No Hit |
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
GCATTCT | 315395 | 0.0 | 43.829834 | 1 |
TAACCAG | 633085 | 0.0 | 43.76121 | 2 |
TTAACCA | 631140 | 0.0 | 43.748398 | 1 |
TGTCCGA | 941460 | 0.0 | 43.737427 | 6 |
GTCCGAT | 938850 | 0.0 | 43.699238 | 7 |
GATTCCC | 938420 | 0.0 | 43.69874 | 11 |
TCCGATT | 938710 | 0.0 | 43.6979 | 8 |
GCAGTTG | 951480 | 0.0 | 43.697742 | 1 |
AGTTGTC | 948315 | 0.0 | 43.695988 | 3 |
GTTGTCC | 940670 | 0.0 | 43.690525 | 4 |
TTGTCCG | 940055 | 0.0 | 43.68776 | 5 |
ACCAGTT | 631475 | 0.0 | 43.686222 | 4 |
ATTCCCC | 930855 | 0.0 | 43.663498 | 12 |
GTACCCC | 625905 | 0.0 | 43.663387 | 11 |
TACCCCC | 622545 | 0.0 | 43.64214 | 12 |
TTCCCCA | 931500 | 0.0 | 43.62745 | 13 |
CCGATTC | 935645 | 0.0 | 43.62428 | 9 |
CCAGTTG | 634490 | 0.0 | 43.611263 | 5 |
TCTGTCA | 313885 | 0.0 | 43.60349 | 5 |
TTCTGTC | 315500 | 0.0 | 43.598198 | 4 |