HH2GLBGXG_n01_AKM137.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	HH2GLBGXG_n01_AKM137.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	16667868
Sequences flagged as poor quality	0
Sequence length	76
%GC	39

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GATCGGAAGAGCACACGTCTGAACTCCAGTCACCTTGTAATCTCGTATGC	1604525	9.626456125042507	TruSeq Adapter, Index 12 (100% over 50bp)

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CGTATGC	176250	67.97337	44
GTATGCC	176580	67.88537	45
TATGCCG	176340	67.76738	46
ATGCCGT	176400	67.66496	47
AGTCACC	178820	67.63033	28
ACGTCTG	180210	67.58203	15
TCGTATG	177360	67.56967	43
CCTTGTA	177920	67.564095	33
CTCGTAT	174885	67.5607	42
GTCACCT	178860	67.520134	29
ACACGTC	180945	67.50012	13
GAACTCC	179830	67.43854	21
CACGTCT	180795	67.41369	14
CGTCTGA	180775	67.39311	16
ACTCCAG	179550	67.375465	23
CACCTTG	178985	67.3676	31
ACCTTGT	178705	67.33153	32
GCACACG	181770	67.29945	11
TGCCGTC	177185	67.27255	48
CACACGT	181910	67.242096	12