HH2GLBGXG_n01_AKM123.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	HH2GLBGXG_n01_AKM123.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	18217690
Sequences flagged as poor quality	0
Sequence length	76
%GC	48

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GATCGGAAGAGCACACGTCTGAACTCCAGTCACTAGCTTATCTCGTATGC	274772	1.5082702581940959	TruSeq Adapter, Index 10 (100% over 50bp)
GTCAAACTCCCCGCTTGACACTGTCTTCGAGGAGAGTCACGGTGCCATAA	28468	0.1562656955958741	No Hit
CCCCAGTCAAACTCCCCGCTTGACACTGTCTTCGAGGAGAGTCACGGTGC	18813	0.10326775787709637	No Hit
GTACGATTGAGTGCAAATTAATAGCCTCCCTTGGTGTTTTAAGGGCCGTT	18652	0.10238400148427161	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TATGCCG	29210	67.42177	46
ATGCCGT	29535	65.957016	47
TAGCTTA	32165	65.43833	34
ACTAGCT	33205	63.5994	32
TATCTCG	32420	63.197056	39
GTATGCC	31870	62.925423	45
TGCCGTC	31110	61.661903	48
CTAGCTT	34320	61.410957	33
CACTAGC	34685	61.057503	31
CTTATCT	33915	60.85503	37
GTCACTA	35585	59.847664	29
CGTATGC	33560	59.798203	44
TTATCTC	34525	59.7494	38
GCCGTCT	32300	59.075592	49
AGCTTAT	35745	58.79615	35
TCACTAG	36285	58.596638	30
CTCGTAT	34930	57.773624	42
TCGTATG	36145	55.657146	43
AGTCACT	38540	55.46688	28
AAAAGGG	34645	54.87838	70