HH2GLBGXG_n01_AKM114.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	HH2GLBGXG_n01_AKM114.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	18465962
Sequences flagged as poor quality	0
Sequence length	76
%GC	49

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GATCGGAAGAGCACACGTCTGAACTCCAGTCACATCACGATCTCGTATGC	434086	2.3507359107529844	TruSeq Adapter, Index 1 (100% over 50bp)
GTGATTTAGCGCCCCGACATTGAACCAGAGTGATCTGGCGTTGGCAAGCG	26763	0.14493152319927877	No Hit
GTCAAACTCCCCGCTTGACACTGTCTTCGAGGAGAGTCACGGTGCCATAA	20497	0.11099882042430284	No Hit
CCGGTTTGTCCCTCTTAACCATTAAATCAGTTCTAGAACCAACAAAAAGA	19576	0.10601126548402948	No Hit
GCAAGTGATTTAGCGCCCCGACATTGAACCAGAGTGATCTGGCGTTGGCA	19351	0.10479280743673142	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TATGCCG	47925	67.88017	46
ATGCCGT	48340	67.22501	47
GTATGCC	50665	64.368744	45
TGCCGTC	51065	63.658394	48
CGTATGC	51810	63.040424	44
GCCGTCT	52355	62.089886	49
ACATCAC	52920	61.74293	32
GTCACAT	53415	61.531124	29
CTCGTAT	52340	61.372124	42
AAAAGGG	50630	60.169468	70
TCGTATG	54710	59.75643	43
CATCACG	55180	59.125496	33
CACATCA	55810	58.55229	31
TCTCGTA	54655	58.52287	41
ATCACGA	55710	58.079273	34
TCACATC	56950	57.509277	30
CTTGAAA	57060	57.185593	60
TCACGAT	56325	57.06624	35
CGTCTGA	58330	56.814392	16
AGTCACA	58150	56.7009	28