HH2GFBGX7_n01_9_bzip1_col_gr.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	HH2GFBGX7_n01_9_bzip1_col_gr.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	16832254
Sequences flagged as poor quality	0
Sequence length	76
%GC	45

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GATCGGAAGAGCACACGTCTGAACTCCAGTCACCGTACGTAATCTCGTAT	32814	0.19494715324519224	TruSeq Adapter, Index 22 (97% over 40bp)

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TATGCCG	5700	46.389652	48
CGTATGC	5860	45.41971	46
GTATGCC	5950	44.96999	47
ATGCCGT	5895	44.91441	49
TGCCGTC	6050	43.53203	50
CCGTACG	6510	42.417416	33
GCCGTCT	6210	41.67529	51
CGTACGT	6665	41.11871	34
GTACGTA	7420	37.36067	35
TACGTAA	7420	37.078953	36
ACCGTAC	7835	35.329956	32
CACCGTA	8400	32.827637	31
ACGTAAT	8355	32.763367	37
TCTCGTA	8035	31.07363	43
CCGTCTT	8480	30.84921	52
GTCACCG	9020	30.6048	29
TCACCGT	9280	29.862665	30
AGTCACC	9495	29.255566	28
TCGTATG	9290	28.687634	45
ATCTCGT	8775	28.532648	42