FastQCFastQC Report
Mon 28 Jan 2019
HGYGMBGX9_n02_S_21.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHGYGMBGX9_n02_S_21.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences19
Sequences flagged as poor quality0
Sequence length151
%GC59

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CGTTTGTTCAATAGAAGCGCTTAGTAGAGGAAGGTGATCATCAGGATTCT15.263157894736842No Hit
GGGAACTACTGGCAAGGCCGGCACCGTGACTTCAGGCGATGCTTTCCTGG15.263157894736842No Hit
CGCGAAGCTATTTGGTGGAGGCCCGGGGCAATGCACGGTGCGTTGAACAA15.263157894736842No Hit
CGATAGATGAGTTTCATAAGTAGTCCCGGACATGCTCCCAGGGTCCCCCA15.263157894736842No Hit
TGTCAGTAGTGGTCACCGCACGGGCGAGCAAGTTGTGGGGACAAAGGAGA15.263157894736842No Hit
TAAGAGATGTGTCATTCTCAAACATGTGCTTATATCTGTTTAAGTCCATG15.263157894736842No Hit
CCCGTGTTCAGTATGTATATAACGCCCGTAACTGTGGTATGTTACTCAGA15.263157894736842No Hit
ATACACGACAGCAGGCAGAGAACAAAGCAACTTGAGCCAGCCCTCGCACA15.263157894736842No Hit
GCATATACCGACCCAAGGAGGTGCAGCCCTCTCCCAGGAGCACTACAAAA15.263157894736842No Hit
GGCTCGAATGGTATCATCTTCCAATGGAAGGGAATGGAATCATCGAATAT15.263157894736842No Hit
TCGCAATGCTGATGCTGCTCAGTAAATAAATAAATAAATAAATAAATAAT15.263157894736842No Hit
GGTGGGGGGTGGGGTGGTGTGCGGGGTGGGTGGGGGGGGGGGTGGGGGGG15.263157894736842No Hit
CATCAAAACGCCACAGGGGCCGTCTGCGTACTGGGGGTGGGAGGGGTGCA15.263157894736842No Hit
GCCGGTCCGGAGGCCCCGGCCCTCTCGGGCGCCCGGCCACCCGGGGGCGC15.263157894736842No Hit
CCGTATCACAACCATAGGAGGTGGGTCAGTTTCTCAACACTGTGCCCATG15.263157894736842No Hit
GGGGGGACCCTCGACGTTGAATGGGGCGGCTGAGTTAGCATTAATTCTCA15.263157894736842No Hit
CTGTGTATCATTGTGGAAGTGGAGGTCAGGCTGTGGCTGTCAGCGACGCG15.263157894736842No Hit
GTTAGGGGGTTGGTGGAGTTACGTGATGTGTTGTTGCTACGAAGTAACTT15.263157894736842No Hit
CCGCAGGAGGCCAACTTCAGGACGCATGAGAGGCAGGGCCGCGGTGACTT15.263157894736842No Hit

[OK]Adapter Content

Adapter graph

[OK]Kmer Content

No overrepresented Kmers

Produced by FastQC (version 0.11.5)