FastQCFastQC Report
Mon 28 Jan 2019
HGYGMBGX9_n02_S_184.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHGYGMBGX9_n02_S_184.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences114
Sequences flagged as poor quality0
Sequence length151
%GC45

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CAATGGAATAAACATCGAAAAGAAACAAAATGAATCAACATAAAATTGAA10.8771929824561403No Hit
GTTTTATACCATATAGGTATTCACATTGTATATTCAATATGGTAACACCA10.8771929824561403No Hit
GTCCAAATATCCGCTTGCAGATTTTACAAATAGAGTGTTTCCAAGCTGCT10.8771929824561403No Hit
ATGCAATGGAATGGAACGGAACGGAATGGAGTGGAATGGAATGGAATCAA10.8771929824561403No Hit
ATCTAGGACATCCAATGAATCTCAGAGTGGTTATCCCGAGTCAAGACCCT10.8771929824561403No Hit
ACTTCACCTGAAAAGAAAGACATACGAGAAAGGAAAATCACGAACAAAAC10.8771929824561403No Hit
GATTCAGACATATCTCTGCACTGATCCCGTGGTGATCCAACTCTTGCCTG10.8771929824561403No Hit
GACCCAAACCCATCCATTTGCACAAGTCTCAAGTACAATTTGTAACTCAA10.8771929824561403No Hit
GTCTTGCACACCAACGGGCTACATTGTCTGCAATCTGGTTACCCGCATGC10.8771929824561403No Hit
ATGCTACTTAACTGTTTTATTATTATCTTTCTAATCTTTTCATGAAGTGG10.8771929824561403No Hit
GAGTAGAGAGGAATGGAGTGGAATGCAATGGGATGGAAGGGAATGGCAAG10.8771929824561403No Hit
TTCTGCCCCGATGCGCACGGGCCCGGGTGTCGGGGGTGCTGCAGTCGGGG10.8771929824561403No Hit
GTCTACTGGTTCGAAGTTATCTAGGCTAGAGTTAGCCAATTCGTCTTCTT10.8771929824561403No Hit
ATCTGTACCCTGATGAATCCTAGTTAGAACTGATGATCCAAGAAAATCAG10.8771929824561403No Hit
GCCTTGGGTGCACCACTACTTCTTTCAGAATATCTCCAAGGGAGATATTC10.8771929824561403No Hit
GTCCACAAACTGCCACAAAGAGCATAGCGCAGACTAAAGAGATGGAAACC10.8771929824561403No Hit
ATATAAGGGAGAGCAATCTCTTAAAATTATTGGGATGACTCAGTCATCTA10.8771929824561403No Hit
TCCCCAGCCTTGTGGGTTTATCTACGTTTGGTCTTTGATGATGGTGATGT10.8771929824561403No Hit
CCTGTAGTTTCAGCTGCTCAAGAGGCTGAGGTGGGCCGCTAGCTTGATAC10.8771929824561403No Hit
GCCGTCGCAGAAAGGTAAGAACAAAACAACTCAGCCGCAAGAATCAAGTC10.8771929824561403No Hit
AATTTGAAAATTTCAAATCTAGAACAATCGCAAAGATCTATCAGTAATTG10.8771929824561403No Hit
GTTTCTGGGATAACTTTTCTCTCACCAATGGGGTAAATGTCCTGAGGGCA10.8771929824561403No Hit
GCCCTCTGTCACGCCCGCATAGGGGCAGCTTGAGGGATCCTTGATCAATC10.8771929824561403No Hit
AAACAACACAATCCAAACTATAAAGCTGTCTTACAGAAAGAAAAACGACA10.8771929824561403No Hit
ATTCCAAGCCTCTGATAACTATCATTCTACTCTCTATTTCTGAGTTCAAT10.8771929824561403No Hit
ACATCACACCACTGCACTCGTCTCGTGACAGAGTGAGACTCCATGTCAAA10.8771929824561403No Hit
GGTGCCATCTTGGCTCACTGCAATCTCCACCTCCTAGGTTCAAGCAATTC10.8771929824561403No Hit
GTGTAGGGGTGTAGGTGTAGTTGGGTTGTGTGGGATGTGTTGTCTTGTGA10.8771929824561403No Hit
CACTAAAAGTGGCAGGATGAAGCAGCAGTCCATAGTGTTAAAAAGCTAAA10.8771929824561403No Hit
TCTCTATCCCTATCCTTCACTCTCTCTCTGCCAGGGCCCACGTCGATTCA10.8771929824561403No Hit
CCCCGCGGCACCAAATGGGGGGAACCATTTGGGAGGGATCTAGTCACAGA10.8771929824561403No Hit
GGTGGGCTGTGGGCGGGCCCCGCCCCGCGGGGCCCCGGGCTGGGCCGCGC10.8771929824561403No Hit
TCACAAAAGTCATCAAAGCGCTCCAATTGTCCCCGGCCAGCTGCTGCCAA10.8771929824561403No Hit
CCCACAAACAGCGTAAAAGTGTTACTATTTCTCCACATCCACTCCAGCAC10.8771929824561403No Hit
AAATAGGTCCTCCAAGCTGTATAGAACTCACCAAGGACATTCAAAGAGGA10.8771929824561403No Hit
CTTCTAGGAGTTAGCGTGCAGGTCGTTCACGTCAGACGTGCGCGAGAACA10.8771929824561403No Hit
AAGGTCTATGAAGACAAGCAGACAGATAATGTAATGGCAGAACGATAGAC10.8771929824561403No Hit
GTCGGGGATAGATCCGGTTGATAACGTTCGATAAGATCAAGCTAAAAAGA10.8771929824561403No Hit
GCTTTGGCCTTACTCATATTTTAATTCAAGATGGATTAAATACTAAAACC10.8771929824561403No Hit
GGCTAGGAAGCGCAGGGCCAGTCTACACCTCGCAGCGGGTGCGCTGGAGA10.8771929824561403No Hit
GTTAGGCGGCATAAATAGGAAAATGGCCATACTGGCCAAGGTAATTTTGA10.8771929824561403No Hit
AACCTAGGGCGGATAGCGGGGACGCGGGGGAACCTCCCTGGCCCTGGCCT10.8771929824561403No Hit
GCTCCAGTCTACAGCTCCCAGCCTGAGTGATGCAGAAGACAGGGGATTTC10.8771929824561403No Hit
GAGGTCTCCTGGCCTCAGCCCCCCAAGCCCGCGCACACAGGACATGCGCA10.8771929824561403No Hit
GTTCCATTCCATTCCATTCCATTCTATTAGGGTTAATTCCATTCCATTCC10.8771929824561403No Hit
ATGTGGAGGCAGGCATCAGAGAGCCTGGGAAGGAGGAGGGCATCTTGGTC10.8771929824561403No Hit
CTGCTGAGCAGGGAACATGACTCATAAGCACGCAGACACTCTCCTCATGT10.8771929824561403No Hit
CACAAGGTCATAGTAGACTTGGAAAGATAGTCACTACAATCAACCTGGAG10.8771929824561403No Hit
GCCGTGAACCTAGTTTAAAAATAAAGGTTTCATATCAGAGCAAGCTCATG10.8771929824561403No Hit
GAATAATACCAGTTTCCAACGAAGTCATAAAAGAGGTCAAAATATCCACT10.8771929824561403No Hit
TGGATTTAGTGATTTATATGAAAAACAGAAGGCTGACGCCAGTGGAAAGC10.8771929824561403No Hit
GAATGACCCTCCACACACATAGCACATTTGAACTCCATTATCGGAAGCCA10.8771929824561403No Hit
CCCCAAGACACATAATTGCCAGATTCTCCAAGGTTGAAACGAAGGAAAAA10.8771929824561403No Hit
GAGAAGGATAAAGAGAAAGGGAAAGAGAAGCGGAGGAGGAGGAGAAGAGG10.8771929824561403No Hit
CTTATACACTGTTGGTGGGAGTGTAAATTAGTTCAACCATACTGAAAAGT10.8771929824561403No Hit
CACGTGGTGTAGTTACAATCCCTTAGCTAGACATAAAGTAACTCCACGGC10.8771929824561403No Hit
CCCTCCCCCTACATTCTCTGCACTCTAGTGTCATACGCTCTGGTCTCAGT10.8771929824561403No Hit
GATAGAGAGTGCGAGGGCGATAGACAGATCGATATAGAGAGATAGAGAGA10.8771929824561403No Hit
GGACGCATGCCCTATCGTATGTAAACTGCTTATGTATGGGCATAAAGTCA10.8771929824561403No Hit
GCTGTTCTGCAGCCTCCACTGGTGATACCCAGGCAAACAGGGTCTGGAGA10.8771929824561403No Hit
CAGGAATAGATCGGAAGTATATAATTACAAGGCACATATTAGCACCCATA10.8771929824561403No Hit
GATACCACACGTAATGAAACTATCTAAAATAATTGAGGATGAGGGACTCA10.8771929824561403No Hit
CCATAGAGGTGGACGGTGCACAACATTGAGAATGTACTTCAAGATCTGAA10.8771929824561403No Hit
ATGCTGCTGGACATACCCCTGGTTAGGGATGACGGAGCGGAACCGCGCAG10.8771929824561403No Hit
GTACAATCCAGACAGAAGCAATCTGGGAAACTACTTTGTGAAGTGTGCAT10.8771929824561403No Hit
CATCCAAAGTCTGCTATCCTTCGTGTATACTTCTCTTTTATTATAAGCAG10.8771929824561403No Hit
TCCTAGAGACTTGTCGAATGGCTTCGACCAAAATGCTGATAGTGACATGG10.8771929824561403No Hit
GAAGATGAGACTGAGATTCCATTATTGTGTGGCCAGGCCTGTGGACTCCC10.8771929824561403No Hit
ATAAATTGGTAATATTGAGCTCAATATATTTAAGAGAATCTTTTAAAAAA10.8771929824561403No Hit
GGGGTAGTGTGGGCGGTGTAGTTTGGATAAGTGTGTGCAGCCGGCTGGAG10.8771929824561403No Hit
GATACAGTGTTAACGGGGTTGCGGCTCTCCACACGGAGATCTTGACGAAC10.8771929824561403No Hit
GTTTAGTAACCAGCGAGGGCGGCCCCACCTCCCACACAGCCATTTTGGAT10.8771929824561403No Hit
AACCAAAAAAAACCAAACATCCACCAACAATGAGAACTACTCACGTAGAA10.8771929824561403No Hit
CTACACACATAAACATTCTTTATAATATAAACACAAGCAACCCAAATATA10.8771929824561403No Hit
CTACTAAAAATACAAAAAATTAGCTCGGTGTGGTGGCACACGCCGGTTGT10.8771929824561403No Hit
TTCGTGATTTGGCTCTCAGCTTGGATGTTCTTGGTTTATAGAAAGGCTCG10.8771929824561403No Hit
CGACAGGGGGTCTGCATTTGAGTTTTCACCTGGAAGACTGGAAGACTGCA10.8771929824561403No Hit
CTCCCGCTCTGTCTCCGTTCCTCTCCCCATCTCTGCCTGTGTTCCCTCCC10.8771929824561403No Hit
GGCTAGGGGCGTCCGCCATTTCTGTGGCTTGACTAGCCGATTTACACCTC10.8771929824561403No Hit
ACCTTATTCATGATTTATCTTTTCTTTACAGAGTGGTCAAAATCATAACT10.8771929824561403No Hit
GCTTAGGATTGTCTTGGCAATGTGGGCTCTTTTTTGGTTCAATATGAACA10.8771929824561403No Hit
AAATCAAAAATACAAAAACCTCAGGAGCCGATGCAAACAACTGAAAGAAA10.8771929824561403No Hit
ATCCTACAGTCCACCTCATTTGTTCCCCTCGCAGAGATCACCACGCTGGG10.8771929824561403No Hit
ATGTTACGAGTGTTGTAAAATCATTTTCTTGAGTCAGATTTTTTAGCAAT10.8771929824561403No Hit
TGACAAAGCAAAGGACAAATAATTTATTATAAATTTATAAAAAAAAGAGC10.8771929824561403No Hit
TGGATTTGCTTCCGGGGGGATCGTGGGCGGCCCGTTTTCCCCGGCCGTAG10.8771929824561403No Hit
AGCCAACACCATTCAGTAAATTACAGCATGTCACTGGCTTTGGCCTAATT10.8771929824561403No Hit
GTTCAATTGCATCACTACCAGATGGACCTGCATTGTAATAGCTAGTACGT10.8771929824561403No Hit
ATTTTCAGGGGAGTGAAAAATGAAGGGTTGTGTTCAAAGTAATGCGACGC10.8771929824561403No Hit
ACCCACTGCTGAACATTTTATAACTTATGATTTTATAACTTATGACTTAT10.8771929824561403No Hit
GAATTAAATTGAAATATGAATATAACTCCATTCAGAATTCCAAGTGCCAG10.8771929824561403No Hit
TCTCTTGTCTGAGCCTGCTTCTCCAGGGGTGTCAGGGAATTGGCCTCATC10.8771929824561403No Hit
GAACGGGACTGACCCGCGTCATTCAGTGTAAATCCGCCAAGATCGGTGTG10.8771929824561403No Hit
TTTCAGTCTGGTTAAGAACCAATTCTAAGGAGCTAGTATCATTAGTTGGA10.8771929824561403No Hit
ATACTCATTTTAGACATTGTGAATTGATCATTGTATCTGAAATTGGCATT10.8771929824561403No Hit
GGACTATGAATACCTGTAACAACACCTTCGTCCACAGCATCCATTCCCAC10.8771929824561403No Hit
CACTTATATATCTCATAGTTAAAAGGCTGAAAATCAAGGATAAAAGGGAA10.8771929824561403No Hit
GCTTAACACGCGCTTGGCGGCGTTCATTGAAATGATTTAGGAGATGGCAA10.8771929824561403No Hit
GTGCAGGGGCCCTGCTAATCTTCAAGGTAGGGTTCCAATTTTAGTATATG10.8771929824561403No Hit
ACATTGGAGGCTGAGTCAGATAATTTATTGAACCCAGGAAGTGGAGGTTG10.8771929824561403No Hit
CCTGGACCCTTTGCGGAGCACTGTCCCGACCCTCTCTCACTCAACTGCGT10.8771929824561403No Hit
TTTGAAATTAGTGTTTACTCTCAGCCGGAGAAAACTCCCAGATGTGTATT10.8771929824561403No Hit
GGTTTGAGTGTGACGAGGTGTGTGGGGTAAGGGGTATCACCCTGTCCACC10.8771929824561403No Hit
CTGCACTCCAGCCTGGGTGACAGAGCGAGACCCTATACTGAAAAAAAATA10.8771929824561403No Hit
GTAAGTAGCACCGAAACTTATCTCGAGCTCTTCGTAGCGACCTGTGCACA10.8771929824561403No Hit
CAATAGGACTATGCCTGGGCACATAAGGTATTATAGAACTAGCCTTTCAC10.8771929824561403No Hit
GTCTGGAACTCCTAGCTTAAAGCACTGCTAACTCTTTGGCTCACCTAAAT10.8771929824561403No Hit
GTTATGATGTAAGATACAAAGGAATAGCAAATTAAACAACAAATCCAGCC10.8771929824561403No Hit
CTGTTTATGTCGAATCATTGAAGATTAAGTTGGGAATTCATTGAGGCCAA10.8771929824561403No Hit
TTTTAAACCTGTACAACCTGTAACACAACATTTTCCCATACCTCTTGCAA10.8771929824561403No Hit
CCCAACACCATATGCTACAGGATCTTAAGAAACTCCATTTAACCAAATCT10.8771929824561403No Hit
ATTCCATTCCATTCCATTACATTCCATTACATTCCATTGTATTCCATTCC10.8771929824561403No Hit
GATGGGGTAAATCAACCATGGACACGCTCGAGACTAACGGAGTAACGCAA10.8771929824561403No Hit
GCGGTGGCTCACGCCTGTAATCCCCGCACTTTTGGCGGCCGCAGGGGGGC10.8771929824561403No Hit

[OK]Adapter Content

Adapter graph

[OK]Kmer Content

No overrepresented Kmers

Produced by FastQC (version 0.11.5)