FastQCFastQC Report
Mon 28 Jan 2019
HGYGMBGX9_n02_S_144.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHGYGMBGX9_n02_S_144.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences21
Sequences flagged as poor quality0
Sequence length151
%GC61

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CCTCGAGGCTCCACGGTTTTCGTCCCAAACCCCAGAGCAGGTGAGGATGA14.761904761904762No Hit
TCCCCGATCAGCGTGCAACACGACCCCTGCGGGGAAGGCGCAACGGGGGG14.761904761904762No Hit
TATAGCTGCTTTTTTTTACGCTGTGGAAGCAAGTAGCTCTTGTTCATTTT14.761904761904762No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG14.761904761904762No Hit
CCTTCCCCCACTTGTTGCTGGGGTGTTTTTTTCTTGTAACGTTGGTTGGG14.761904761904762No Hit
GCCCATTACGGGGTAGATCCCCAAAGTACTATACATCATGCGTCTATAAA14.761904761904762No Hit
GGCCAGGAAAACACTATTATTCAGGATGTACTGGTTCATATGGGGCACCC14.761904761904762No Hit
CTCTGGGAAAAACTTAATGGCTGAAAGGTCTTCAAGATACTCTTTTAACT14.761904761904762No Hit
CGTTAATGAGGGCGACCACCCGCGGGGTCACGTCCACGCCGCCGCAGGGG14.761904761904762No Hit
GTGGTGCCCGGGGCGCCGGGGCCCGGGCCGGGCGCGGCGGCCGGGGCGGC14.761904761904762No Hit
AGTAGAAGGAGGAACTTTGGGAAGTAATTTGGTTTTGAGGAGGATGGAGT14.761904761904762No Hit
ACGCAAGACGAGTTCATTAGGTATTCCAGACCCAGCCTAGGGCATGAGGG14.761904761904762No Hit
ATATAAACGGAGCTTAGTCGTCAGCAAGCTATGTGCAGTCTGGGCGGCTC14.761904761904762No Hit
GGATTAAAGGGCTGAGAAATGGAGCCACTGATCCCTCGCGGTGTTTTAAT14.761904761904762No Hit
CGATCTGCTCGCGAACCGGGCGGCCTGACGCGGGCAGGCGGGGGATTTCG14.761904761904762No Hit
ATCGGTGGACATGTAGGGGCTGCTATGGGCGCTCCTTGCCGCCGGAGACG14.761904761904762No Hit
GGATATGGCACATAACACCACGGACTCCCCTATGCAGCCTGCGGACTCGA14.761904761904762No Hit
GTCTTCTCGGGCTCCGTCGATCCCTCGTCACCTTTGTGCGCCGATGCCTC14.761904761904762No Hit
CTAGAAGGCCCGCTTAATAAAAGGGAAGGCCACTTGACCAACTTTGGGTT14.761904761904762No Hit
GTTCTTGATGTAGGCGTCGAAAATCAAATCGAGGCGGCCGTTCAGCAGCG14.761904761904762No Hit
CATCTACATCACCCTAAACAGCCGGGCGTTTGCAGACAGTTATGCAGGCG14.761904761904762No Hit

[OK]Adapter Content

Adapter graph

[OK]Kmer Content

No overrepresented Kmers

Produced by FastQC (version 0.11.5)