FastQCFastQC Report
Mon 28 Jan 2019
HGYGMBGX9_n01_S_21.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHGYGMBGX9_n01_S_21.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences19
Sequences flagged as poor quality0
Sequence length151
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGTGGTACGAGGGTGGGAGCCCTTTCCCTAAAAAGCAATCTGTTTTTTG15.263157894736842No Hit
GGTGCAGGCTTCGCGAAGATTCGGCAGCCGCAGGGCCGGGCGCCTGGCCA15.263157894736842No Hit
GGCCAGGAGGCCTGTACCAGCTCCCTTCCATAGAAGTGGCTTTGTTGCTA15.263157894736842No Hit
GCGGTATACTTATTCTTCACTACCATCAACATGGCACCCGTTGTCAACTC15.263157894736842No Hit
GGCATAGGGTGGCTGAGGCTATTTGGACCTATAGCAAACTTTGGCCTCTC15.263157894736842No Hit
GTGGAGTGCAGTGGCATGATCTCGGCTCACTGCAACCTTCACATTTCCAG15.263157894736842No Hit
GGGTTGGGGGGTGGTTGTTTGTGTGTTTTTTGCATTATTTTTGTTTTTGA15.263157894736842No Hit
CGCGCAAGTTGGGCAGCGGCCGCCGGTCCCTGCCCCTGGACGGAGCCTGG15.263157894736842No Hit
GGACCGAGGCTTCTATGGCCTTCGTGGCCACAGAGCCGGACCAGCTGCCC15.263157894736842No Hit
CCACCGCACACCTGCAGTTAGAGGTGATGCACCAGCCTCCACAGGGACCT15.263157894736842No Hit
GGGCCGGCTAATGTCAGAGGTGCGCCAACCTGTCCACACAAATTCAAACT15.263157894736842No Hit
CTGGGGACCAGACTAGTGCATGACTGGCAGTCCCTGAGAACCGACAACAT15.263157894736842No Hit
GGGGGTATCTCTGCAACAAGAGAACCAAATCACCTTCCTGTCCCTGACAA15.263157894736842No Hit
CAGGGCCCCCCTCCAGCATTCTGGAGAGGGTTAAACTCCACTGCGATAGA15.263157894736842No Hit
CCCGTACCCTTCCAAGAGGCCACAGTCCCAGCCAGGAAAAAGTATTCGGC15.263157894736842No Hit
CCCTCCCAGCGGGCCACGCCGGCCCGGGGGCGCCCGGCCGCCCGGCGGCC15.263157894736842No Hit
CAATAAATAAAAAAAAAAATATAAACATAACCAAACCCAAAAACCACAAC15.263157894736842No Hit
CATCCCACAGAAGTTTCGCAGAATGCTTGTGTGTAGCTTTTATTTGAAGA15.263157894736842No Hit
GGGGGGGGGGGGTGGTGTTTCCGTTTGATTCATTCGTGGTTGATTGCATT15.263157894736842No Hit

[OK]Adapter Content

Adapter graph

[OK]Kmer Content

No overrepresented Kmers

Produced by FastQC (version 0.11.5)