FastQCFastQC Report
Mon 28 Jan 2019
HGYGMBGX9_n01_S_184.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHGYGMBGX9_n01_S_184.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences114
Sequences flagged as poor quality0
Sequence length151
%GC45

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGTATGGGAAATGGCAATGATACCGCCTTTTTAGCTGGTCTTG10.8771929824561403No Hit
CTTCTCTCCCCTTCCCCCACCCCTTGCCGGCGATCTCATTCTTGCCAGGC10.8771929824561403No Hit
CCCCTGTAAGAGCATTGCACACCTGCAGTGCCTTTCTGTACTCATTGGAG10.8771929824561403No Hit
GTTAAAAACAATTATGGGTATCTTGAAAGGCAAGGGCGACATTACCATCA10.8771929824561403No Hit
GGGTTACCCTGTGGGGTCTCCCTGGCAGTGACCCAGATGTGCTTCAGGTT10.8771929824561403No Hit
CACTGATGAAGCTTAGTTTGGCTGGATATGAGATTCTGGGTTGAAAATTC10.8771929824561403No Hit
ACATAAAAGCTGTGAAAAAATACAAGCATAAGACATGATTCTAGTGGAAG10.8771929824561403No Hit
GATCAGTGCCTTGCGGCCGATCATTTCGTCAAGGGAACGAAGAAACGGTG10.8771929824561403No Hit
GTACAAAAAGAGTGTTTCCAAACTGCTCAATCAAAAGAAAGGTTCAACTC10.8771929824561403No Hit
GGGAGGCACCACCCAGTAGGGGAAGACTGACACCTCACACGGCCAGGTAC10.8771929824561403No Hit
TCTGTGCATCTTATATTGTTGTGAGGAATAAACAACAGAAAGCATGGGAA10.8771929824561403No Hit
GGTCGATAACAGTTTCTGAATCTTCCCCGAAGATGTAGCTGTTTTCGTCG10.8771929824561403No Hit
GTAGAATATATCATTTATATATGACAACAAAAATATGAACTACGAGATAT10.8771929824561403No Hit
CCCCAGGGGCAGTTGAGGCTTTCTGGACAATGCAACCAGTTGCTGGTCTT10.8771929824561403No Hit
GCTTTGTGATGTGTCCATTCAACTCACAGTGTTTATCATTTGTTTTCATA10.8771929824561403No Hit
ACCTAGACATTACCATTCAGGACATAGGCATGGGCAAGGACTTAATGTCT10.8771929824561403No Hit
CCGTCTAAACTTAGCTATGGGAACGTGAACAAGACTTAAATTAGCACAGT10.8771929824561403No Hit
GATTGAGCCCAGTAGGTTTATGTTATAGTGAGATGACATTGTGACAACCC10.8771929824561403No Hit
GTACCAGAAATGCTCTCAACAGAGGGTGGAAAACATACAGAATCATGGAG10.8771929824561403No Hit
GGCCTCTTCTGATCCAATGAATATAAAACCAAAAAGCACCGTCCAAATAA10.8771929824561403No Hit
GGTTTGAAACACTCTTTTTGTGGAAAATTCAGGTGGATATTTGGATAGAT10.8771929824561403No Hit
GGGTAGAGATAATTAAATTTGGCCCCAGCTGGGAAGAAGAGTTGTTCTGT10.8771929824561403No Hit
GCCCCCCTCGGCCGCACAAAGTACTGGGAGTACCGGCGTGAGCCACCGCG10.8771929824561403No Hit
GATTTATATGTGTGCTTAATAGGCATTGACTCATCAGTCTGTGCACCTGT10.8771929824561403No Hit
GCTTATTGTCTAGACTTGTCTAATAATAATTTTTTTAATATTACCTAATT10.8771929824561403No Hit
GCGGTGGCCATGGTTAATGAAGGGTTAATCGCTAAGAACACTGAAGTGCT10.8771929824561403No Hit
GAAGGCAACCCGTTTTACTCTGTGTACTGATTCAAACATGAGTCTCATCC10.8771929824561403No Hit
CCTGTAATCACAGCACTTTGGAAGGAAGATAAGGGCAAATCACAAGTTAA10.8771929824561403No Hit
GGATGTTTGCATCTGTTTTTTGGCTGCATAAATGTCTTGTTTTGTGTATT10.8771929824561403No Hit
GTGAAAAAGAGAGTATCCCCGGATAAAAACTAGAAGGAAGCTATCTCAAA10.8771929824561403No Hit
GGCCTTTATTTTTGCACCTTTGCATACCAGGGAATTTTTAGTTCCATGCC10.8771929824561403No Hit
GGGACTGTAGGCGTAGATACCTGTTTACTGAAGCCATCCCATATCTGCTA10.8771929824561403No Hit
CCCATATTTATTGCAGCACTATTCACAATAACCAAGATCTGGAATCAACC10.8771929824561403No Hit
GGGGTTATCCCTAATCTGCAAATAGCACGGCGACTCCAGTGTTTAAAGTT10.8771929824561403No Hit
TCTCCGGGCCCCTGCGTGAACTGATAAGAAAAGTCATTCCTACTGAGATA10.8771929824561403No Hit
GAATATTTCTGACACTGATGATGATGTTAATACATATTTTGCAAGATATT10.8771929824561403No Hit
TTCTCATCCAGTCGCCACACCTGCTCCTAGGTCTTTCTGTCTTGAAATTA10.8771929824561403No Hit
ATATTAATGTATTTCTAAGAAAAAAAGTTTCAGTAACATGACATAAAGTT10.8771929824561403No Hit
GGGGCAGGGTTGGGGCCAGAATCCAATCTCTTGACTTTTAGTCAAGTGAT10.8771929824561403No Hit
GTGCGGAACATAGCAAGGACATGGTCCCACCCTCAGGGTGCTTATAGCCA10.8771929824561403No Hit
GTGGGCATCTCCCTTATTCGTGCTTATCAGCCTGCCTCTTAACGACGGTG10.8771929824561403No Hit
GCGTAATCCTTTCGCTTAGCCGCTGATACCAAGTACCAACAGCGGGCATC10.8771929824561403No Hit
CAGCTGGGCCTGGGGGACCACTACCATCAAGGCGCTTAGACCGGCAGTGG10.8771929824561403No Hit
GGGTCTAACTAATCACTTGCAGACTTTACAGACAGAGTCTTTCCAAACTG10.8771929824561403No Hit
ACTTCATTCCATTCAATTCCATCCCATTCCATTCAATTCCACTCAACTCC10.8771929824561403No Hit
GTGGTACAATCTTGGCTCACAGCAACCTCCTCCTCACAGGTTAAAGCGAT10.8771929824561403No Hit
GGCTGCTGTCTTCAGGGGCCCTCATAAGAATTAGAGACATTGCCATTGTG10.8771929824561403No Hit
CTCCTGGGTTCAAGTGATTCTCCTGCCTCACCCTCCTGAGTAGCTGGGAT10.8771929824561403No Hit
CCATTCCATTCCATTCCAATCCATTCCATTCCGTTCCGTTCCGTTCCATT10.8771929824561403No Hit
AGCATCCTCACAGTTAGTCCAGGGCCGAAGCTTTGCACTCCAAGATTACA10.8771929824561403No Hit
TCTTAAAACAGATAATTCATCAATTCAAGTATTAGGGAAGATGATCATAT10.8771929824561403No Hit
GGAGTTCAGTGCCGCAATCACAGCTAACTGCAGCCTTGAACACTGCGCTC10.8771929824561403No Hit
GCCGTTAACTTCAGCCTTATCTAACCGCCTCCGCTCGCTTTACGCCCAAG10.8771929824561403No Hit
GTGCCAAGCCAGGGCTTTCCGCCCTTAGCATGATGACACAGGCTGCACAA10.8771929824561403No Hit
GGGTATGATCGGGGGCTTGAGGCGTGGGTGCGGGCCGGAAACGAGCTCGG10.8771929824561403No Hit
CCTAGCCTAGGTGGAGTTCTCATCACTTCCCTCTTGCCCCCCCCCGCCTT10.8771929824561403No Hit
GAGGTTTACAGGGCGGGGTGCTGTAGAGGGTCAGGGGATGGGATCAAGAG10.8771929824561403No Hit
GCCCTACGTTGACACTGCATTTCTGATTCTGACGGGATGATTTTAAATTT10.8771929824561403No Hit
CCTTCATTCCAGCCCCTTTCCTCCACCTGGCAAAAGGGGAATTATGGATA10.8771929824561403No Hit
CAGTACAATAGGGAAGCCAAAGATGTAAACAAATGGTGACAATCAGTGAC10.8771929824561403No Hit
GGCCGGGAATTTCAGCAGTTTGTGAGGCAGAGGCGGGGCTATTACGTGCT10.8771929824561403No Hit
ATGGAATATAGTCCAGGGCACTGGGTATCTGAATGAGCATGGGACAGATA10.8771929824561403No Hit
GGAGGCACTAGGGTCAGGGACCCACTGGAGGAGGTGGTCTGTCCCTAAGC10.8771929824561403No Hit
GTGTAACAATCCGTCATGGTGCCTTCTCTGGACTATCTGGAGAAAAAGTA10.8771929824561403No Hit
GGTGGGGTCTGGTGGTGGCAAGGCGGTGCATTGCCGGGGCGGCGCAGAGG10.8771929824561403No Hit
ATGGAATGCAATGGAATGGAATCATACGGAATGGAATGGAATGGAATGGA10.8771929824561403No Hit
GGTTGGGGAAGTTCTCCTGGATGATATCCTGAAGTAAGTTTTACAACTTT10.8771929824561403No Hit
CCGCAGGGCTCATTCTCCAAATGTAACCTCCTCACCATCATGTTGTCTGT10.8771929824561403No Hit
CCGTGCTGGGAGCACCACTACTCTCTTCAAAGCTTTCAGACAGGGAAGTG10.8771929824561403No Hit
GTGTGTATTCAACTCACAGAGTGGAACCTTCCTTTATTTAGAGCAGTTTT10.8771929824561403No Hit
GGGGCGGCCACTGTACTAAAGACGATCACCCAAAATGGTCAGCTTTCTGG10.8771929824561403No Hit
GAATTTAAAATCACACCATGGACAACAATAAGTTTGAACAATAAAAAATA10.8771929824561403No Hit
GTGTTGGAATTATAGGCATGAGCCACCATGCCCAGCGTGGAGAGAGGGAT10.8771929824561403No Hit
GTGTAGCATGTGTGCAAGGATGAATAAATAAGTAAATGGAAAACAATAGA10.8771929824561403No Hit
GGGCCGTGCGGAGTGAGGTGGTGTTGCCAGTGGCGGCGGCCCCGGCGGGC10.8771929824561403No Hit
TCCGTGAGGTTCTCAGAAAAACTTACAGGAACATTCTAACCGGATTAAAT10.8771929824561403No Hit
GTCTAGCAGCACGATTTCGCCATCAATTAGCTGCATGGCTACTTCTACAC10.8771929824561403No Hit
CGTATTCAATTCTTTCTCTACTAACACTCTGTGTAGGTAACACCACATTG10.8771929824561403No Hit
TTGGTATTCAGAAGCTCTTTAGGGTAATCAGATCCCGTTAGGCAAGTATG10.8771929824561403No Hit
GGGGGGGGGCCAATTCCCGTGAATGTTCTTTCCATGCTTTTTCGGCATTT10.8771929824561403No Hit
GAGCACAAATAAGGGGCAAAAGGAAATGAATACAAGGTAGAATTTTACAG10.8771929824561403No Hit
CTGCAGGGGAATGGAATGGAATGGAAGGCAATGGAATGGATTCAACTTGA10.8771929824561403No Hit
AGTAAGGCGCCCAGACACCATGTGGACAAGGGGAGGAGAGAAATCAGAGG10.8771929824561403No Hit
ATCCTAGGCCCAGCCCACAAAACCATTTTTTCCTCCTGGACGTCCAGGCC10.8771929824561403No Hit
GCCTTATAGTGTCCACCTTATTCTTTGTCACTATTTCCATTTCCCAGCCA10.8771929824561403No Hit
GAATTATAATCCCCATTTTACAGAGAACGAAACTGAGGTGCTGGTTGCTA10.8771929824561403No Hit
GCATAAAACCACATGAGCCAAAAATATTTTCCAAAATGAGTTTAACTAAG10.8771929824561403No Hit
CTCCTGAATACAGCACACTGATGGGTCTTGACTCTTTATCCAATTTGCCA10.8771929824561403No Hit
GGTGAAAGTAAACAGCAATGATTATATTATGCAGTTAAGAATATAAGTGA10.8771929824561403No Hit
GGCCCCGCTGGCCCGGGGCAGTGAGGGGCGTAGCCCCGGGGCTGGCCGCT10.8771929824561403No Hit
AAGAAGAAATACCAAGATGAATTAGGCTATATCTTGACACCAAGTGAAAA10.8771929824561403No Hit
GTAGAAAGCCAACAAATAAAAAAAGAAAGACTGAAAGAAAAAGAAAATCT10.8771929824561403No Hit
GTGGGAGCCCAGGGGAAGCCGTGCGCACGGGCCCAGGGGTGGGGGTGCGG10.8771929824561403No Hit
GACCAAGAGAAATGTCTCTAAGATTATGAGTATTGAGACACTGCTTGTTG10.8771929824561403No Hit
GCTTCACAGGATGAGGCCTGGATTAGTCCCGACCAAAACACCCCCATTCT10.8771929824561403No Hit
TTGGAGAACTAAGGCAGACTGAAGGAAACAGTTTCAGGCTGCCTTTAGAG10.8771929824561403No Hit
CCACCGGGCTCGGCCCGCGGTGGAGCTGGGACCACGCACAACTCACTCTG10.8771929824561403No Hit
CACAGAGGTATCACAATCATTCTCAAACTCAACTTGAAATACTTGACTCA10.8771929824561403No Hit
GGAGAAGCAAATGGAATTATGAGCAGACATGGACATTGAATACACATGAA10.8771929824561403No Hit
ACCCTGCACACCTCCAAAGAAACACGGGAAAATGAGGCGACCAAATGAAG10.8771929824561403No Hit
CGCCGGGCCCGGTGGCCCCTCGCGCTTTTCTGCCGGCGGCCTCGGCCTGC10.8771929824561403No Hit
GCCTGTGTCCCTCCTCAGAGGCTGTCCCAAGAGAAGCAGACCTCAGATTC10.8771929824561403No Hit
GGGGAAGCATGAAGGAGCCACGGGAGATTTTGCAAAGGGAATGCCAAAAA10.8771929824561403No Hit
CCACATGATCATCTCATTAGATGCAGAAAAGACTTTTGATAAAATTTGTC10.8771929824561403No Hit
GGGGGGGGGGGGCAAGAATATTGGTTAAAATTTAAGTTTAATGTTGAATC10.8771929824561403No Hit
GAGATATGTCACAATGCCATCGTAGGCAGAGCCTAGACAAAACTTACATC10.8771929824561403No Hit
ATCTAGTATGTTGCATAAAAATCTGCTCTTAAAGGTTTAGTGCAGCGTTA10.8771929824561403No Hit
CTATCTAGCAAAGCAGAGCTGGCACTCGGTGACGCACAGACCAGTGCTTG10.8771929824561403No Hit
GTATATAGTAGGATACGGCCATATTTTTCTAATGTTCTCTGGCTTATCTG10.8771929824561403No Hit
CAAATCCCTTCGATGATTCCATTCGTCTCCAGTCGGTGATTTCATTAGGA10.8771929824561403No Hit
AACATACACAGAAGATTTGAAATGGACCACTAAATTTCACAAAACACAAA10.8771929824561403No Hit
GCATCACGTAGTTCTTGTGCCATGGTTTTCAACTCCATCAGGTCATTTAA10.8771929824561403No Hit
GGTGTGGTGGCACGTGCCTGTAGTCCTAGCTACTTGGGAGGCTGAGGCAG10.8771929824561403No Hit
GGCCATAAGAGTTACCCACTTTGGTGCATTGTTTCCTCAAGAATCACTAC10.8771929824561403No Hit

[OK]Adapter Content

Adapter graph

[OK]Kmer Content

No overrepresented Kmers

Produced by FastQC (version 0.11.5)