FastQCFastQC Report
Mon 28 Jan 2019
HGYGMBGX9_n01_S_184_1.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHGYGMBGX9_n01_S_184_1.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1216
Sequences flagged as poor quality0
Sequence length151
%GC41

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ATCCTTGTGTTCAGCTCTTTCCAAATTAAAACAAATATACATTTTCTAAA30.24671052631578946No Hit
GTCACGACAATCGTCTTCGGCAGACCGGTGACCAGGTTACGGCCGCGCAC30.24671052631578946No Hit
GACTACGACCTCTCCCGCCTTTCGGCAAAGTATCTTTCTCTCAGTAAGGG30.24671052631578946No Hit
GATGATTCTGTCTTCCAAAGAGAACAAATCACAAGGATGTTAAAAGGAAC20.1644736842105263No Hit
TTGGAGGACTGGCACGATGCTGAACAGATTCGTGAGGAGGCGTTAGAGTT20.1644736842105263No Hit
CTTATAAACTTAAAGATTTATATTAATATTTTTTAAAATAATTTATCTCA20.1644736842105263No Hit
CTATTAGACAATACAAGTGTGTATGACCTGAAACTAAACATAAAAGAAAG20.1644736842105263No Hit
GTTAGCAGCCAATGTAAATGGAGAATTAACAGACCTTCGTGAAGAACTCG20.1644736842105263No Hit
CTATATGGATTTTCTGAGGGATAACTCTATAGACGGCAAACCAACAATAG20.1644736842105263No Hit
ATCATAACTGCCTCAGTGGTGCGCTTCTTCAGTGTCATAAGCAATCTACC20.1644736842105263No Hit
GACTTCAAAAGGGCGTTAGTAAGGGTCTTAAAGGGCATCTTTTGCAATCT20.1644736842105263No Hit
CCCTTATTCAGTTTCTTCATGCTTGGCAATGAGTTGATTTTCAGTGAATG20.1644736842105263No Hit
CCAAATAGAAGGTAAATATGAAAAAGGTAAAAAAGTTGTGGTGATAGAAG20.1644736842105263No Hit
GGGCTGCTCCTGAAACTGCTACAGGAACAGGAAACTTGAAACAAGATTTT20.1644736842105263No Hit
GCTTCAGAATATATAGAGAAGGTAACAGAACTTACCAACCTCTTTGTTTT20.1644736842105263No Hit
GTGTTGAGTGCTTTTACTATACAGACACAAGCGATATCGATTAATGAGTT20.1644736842105263No Hit
GTGCAAAGGTATGTCACAAAGCCCCCTGTACGCAAAGCCTAGACAATGGT20.1644736842105263No Hit
GTCATGAATGTTCAAAGCTTTGGAGTTTGGGTTTTCTTGTCCAGGTGCTT20.1644736842105263No Hit
TTCCAGTGCTAGTCCTTGTCCCTGAGCATATGGTTGTTGAATAAATGAAT20.1644736842105263No Hit
ATACAGATGGTTATATTTATCTGATGGGGAATATTAATAGAGAAACAGGA20.1644736842105263No Hit
CCCTTGCAGTTCTACCTAGGATGACATTGCTTCTGTGGCATTAGACTTAT20.1644736842105263No Hit
ACATATACACAACACAGCCATAAAAAAGTGACATTATGTCCTTTGCAGCA20.1644736842105263No Hit
ATTCACCATCTGGTCCTCCCTGGTTATCCAATCTCATTGCCTGCTGTACT20.1644736842105263No Hit
GTTTTTTGATATAATCTATAATCTATAATGCGAATAAATATATTGCTTTT20.1644736842105263No Hit
GTCTTTAAGTGTGTCCTGCAGGGACACAGAGGACTTCCAGTGAATGAAAA20.1644736842105263No Hit
GGGCAGCCCTTTGAACTCAGTGTCTCAATCCCACAGGTGGGAGGTTCCCA20.1644736842105263No Hit
AATTATGACACTCCTTAACCAAAAAGGAAAATTTATTAATTTACATTAAA20.1644736842105263No Hit
GCTGTCAAGGGTTTCTTCTATAAGGACACTAATCCCATTCCTGAGAGCTC20.1644736842105263No Hit
GAGTTCCAACTTTCTATTGATACAGCAGTTTTGAAACACTCTTTTCCAGA20.1644736842105263No Hit
ATTCTGCAGCCTGCCAAATTATTAATATATTTTTTACTTAACAGTTACAG20.1644736842105263No Hit
ATGATAAAGTATGTCCAATTCTGTGAGTTGAATGCAAACATCACAAATAA20.1644736842105263No Hit
CCCCCTGCTCAGAAAAAGCGGAGGGCTACCTGCCCGAAACCCTCGACCGG20.1644736842105263No Hit
GACGCAGAGTGCCTGATGAAGGAGACACAGAGATGCGGCAGCAGAGCCTG20.1644736842105263No Hit
GTGAGAGAGGGCATCCCTGTCTTGTGCCAGTTTTCAAAGGGAATGCTTCC20.1644736842105263No Hit
TAGTTAGACTTGAAAAGGGCATCTTTTACAAGTCAATTAGGCGTCTTTTA20.1644736842105263No Hit
ATATCAAATGCCCTATTTATCAACAAATTACACCAACAAATATAGTACTC20.1644736842105263No Hit
TGATGAGTCGACAAACACTCAGAAGGTGCGCATCACTGACCCGGGTTCTA20.1644736842105263No Hit
CTATTTGGTGGTAAGAAGAAATGAGCTTTCAAGCCATGAGAAGACATGGA20.1644736842105263No Hit
AATTATATGAGTGGTTGGGATATGGAAAATGGAAGCCACTATGGAGTAGA20.1644736842105263No Hit
ATTATATGCTATTAAACAATCCAATATGGATTATGAAGAGGAATACCCAG20.1644736842105263No Hit
TCATAGGCTGAAGCCATCCTCCCACCTCAGCCTCCTGAGTAGCTGGGACT20.1644736842105263No Hit
TCACTGAGTAGCTTGAAACGTAGTTTGCTTTGGCTGGTTTTGATTTCAAA20.1644736842105263No Hit
TAATTAATTAAATTCTTGAAAAAATAAACTATATTAGACAGATGTCATCA20.1644736842105263No Hit
GTAAATTGGCATTTTGTTAATAGTTGTAATATGTCATGTAAATACTGTTT20.1644736842105263No Hit
ACTTTGGAGGCTGAAGTGGGAGGTTGAGACTGCAGTGAGCTGTAATTGTG20.1644736842105263No Hit

[OK]Adapter Content

Adapter graph

[OK]Kmer Content

No overrepresented Kmers

Produced by FastQC (version 0.11.5)