FastQCFastQC Report
Mon 28 Jan 2019
HGYGMBGX9_n01_S_17.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHGYGMBGX9_n01_S_17.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences10
Sequences flagged as poor quality0
Sequence length151
%GC35

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGTTTGTCGGCTTCGATGGGTGTAGGGGGGGCGTG110.0No Hit
CAAAATGATAGCACCAAGTAACATACGAACTAAAAGTAGTTTATAGCTAT110.0No Hit
GTGGCATGGTGAGGGTGGCTTTTTTACGCCACTTCGTAGTTCAAATGCTA110.0No Hit
AATAGACACTAAGACAAAAACTAATATAAATAGAAAATACAAAAAAAAAC110.0No Hit
TGTTCTGAGGATGGGATTAATAAAGGAGTTTATTGTTTTTTTGTAAGTAT110.0No Hit
ATATAGGTTCACCCAGCGCGATATATCGGTTCACCCAGCGACCAATATAG110.0No Hit
ACCCCATATGATTCTACTAAAGAAAATCGCCGGACCTTTGATTAATTATA110.0No Hit
GGCGGACTGTTGTTGAAATATTTTGGGAGAAAGGATAAGAAGGTTGAGTT110.0No Hit
GGGTATTGCAAATGAATACATTTCAATCAACTAAAAATAGAAACTAAAAT110.0No Hit
CTTCATTCTATAAATAATTTATTTTAATTTGTAAGTAATTTTCTAAACTA110.0No Hit

[OK]Adapter Content

Adapter graph

[OK]Kmer Content

No overrepresented Kmers

Produced by FastQC (version 0.11.5)