FastQCFastQC Report
Mon 28 Jan 2019
HGYGMBGX9_n01_S_144.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHGYGMBGX9_n01_S_144.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences21
Sequences flagged as poor quality0
Sequence length151
%GC58

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GCATATATTGTAGAGGAAACTGTAGGATACATGTGCGTTCAAAAGGCAGA14.761904761904762No Hit
AGTCGGTATTGAGCAAGAAAAACCACATAGTTTTACTCAGAAAGGTTAAA14.761904761904762No Hit
CCCGCTGCGCCGGCGCGCCATCGGCGGCCTCGTCATCCTCGACGGCGTGG14.761904761904762No Hit
AGGGTTAATTGTTGCCAGAATTCAATGACCAGCCAATGTTACTGGTGGTG14.761904761904762No Hit
GGGGCGAGACTGGCGTCAGGGATGAGTGTGCCCATGCTGTCCGGTGCTGT14.761904761904762No Hit
GATATTGGGAGGCACGGAGGGGAAGAGTATGTTAAAATCCCTAAGACCAG14.761904761904762No Hit
CTCCGGCAAGGGCATCGGCGCCATCCCCAAAACGATCGGTAACCCCGCCC14.761904761904762No Hit
GGGCCAGCCAGCGGGGCGCCAGAGCACGCCTCCGGCCCCCAATCCAACCA14.761904761904762No Hit
CGCGGCCACTCAGGCTGGAAGACAATGGCATGAGCATAGCTCCCTGCCGT14.761904761904762No Hit
GGTAGCGCCCACGGAACACGCGCGCGCCCTCGATCGCCTGGATGTCCTTG14.761904761904762No Hit
GGGGTGTGCTTTACTTCGCTCACGACTTAACCAGCTGTCCCACCGATATT14.761904761904762No Hit
GGGGCGTATATTGTGATGAATTTATACAATAGGCTACTACTCAGCGATAC14.761904761904762No Hit
GCCCGTCCCCGTCGGCGCGTTCGTCACCACGCCCGGATCGCCGCCCGGGT14.761904761904762No Hit
GCGCAGTGTTCACTTCCCACCACGGAGTGCGCATAGGCGGTGGTGGTGGT14.761904761904762No Hit
GGCTTTGTAGCACTTCGCCCTACGATTAACGAGCTCTGTGTTCTAGATCT14.761904761904762No Hit
GGGGAGATGACGATTACGACAAAGAAACGCACGATGACGAGGCAAACGGT14.761904761904762No Hit
GCGCCGTCCAGGCGGACGGCCTGGGCGCGCAGCTCCCCCTCGGCGGTCGC14.761904761904762No Hit
GGGGGGTTCAGGGTTTCATGTTCAGTGCAGCAGGAGAGCATTTGTCTCAC14.761904761904762No Hit
GGGGGGGGGTGGGTTTCTTGACAGAATTGGAAAAAACTACTTTAAAGTTC14.761904761904762No Hit
ACCCTAAGAAACAAAGTCATGTTTCCCAAACCCACTTCTGTTTCCAGTTC14.761904761904762No Hit
GGGAACCCGAGGTCTCGGGTGGCACCTATGGGGCTCCTCGCATCCGCCAT14.761904761904762No Hit

[OK]Adapter Content

Adapter graph

[OK]Kmer Content

No overrepresented Kmers

Produced by FastQC (version 0.11.5)