FastQCFastQC Report
Mon 28 Jan 2019
HGY2NBGX9_n02_S_214.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHGY2NBGX9_n02_S_214.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences55
Sequences flagged as poor quality0
Sequence length151
%GC66

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG610.909090909090908No Hit
AGCCGTGGGTCGGTTGGCTTTTTTAAGTGAAGCCCATTTGAATGGCATAA11.8181818181818181No Hit
GGGCTGCCCCGGGCGGGGGGGGGGCGGGGGGAGGGGCGGGTGGGCGGCCT11.8181818181818181No Hit
GCCTATACGTTTGTCATATATGGCTTTTATTATTTTGAGGTAGATTCCTT11.8181818181818181No Hit
GCTGTAGACAGCTGTGCTTCAGGGAAGATCACTTTCTTCCCACACCATCA11.8181818181818181No Hit
GAATGGCGTGAAAAATTAGTGGAAGCAGTTGCTGAAACTGCCGCAGCTTT11.8181818181818181No Hit
GTTGTGTATAGCGTTGGGGTGTGCGTGCTGGGAGTCGGGGGAGGTTGGGG11.8181818181818181No Hit
TGATTACACTTCCAAATAACACAAAAAGCCCAAGAAAATAAAAGAGGGAA11.8181818181818181No Hit
TTGATGAATGACACAACTTTAACAGAGGATGAAGCTGTTGTAGAAGTATT11.8181818181818181No Hit
CACTTTATTCTGAATAGGTACAAACGTGCACTCATGGCCGGGCGTGGTGG11.8181818181818181No Hit
CGGGGGGGGGGGGGGGGGGTGGGGGGGGGGGTGGGGGGGGGGGGGCGGGG11.8181818181818181No Hit
GCGAACATCCAAACTATAAAAATCATATGCAGTAGCCATAGTAGTCTGAA11.8181818181818181No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGTTGGGGGGGCGGGCGGGGGGCGGG11.8181818181818181No Hit
ACAGTAACCAAAACAGCATGGTTATGATACAAAAAAAGACATACAGACAA11.8181818181818181No Hit
TATTTGGCGTGTGCGGGGTTCTCTAGCGGGGTGGTTGGGGCTTGCCCCCG11.8181818181818181No Hit
CACTATAGGTGTGCGCCACCATGCCCAGCTAATTTTGTAATTTTAGTAGA11.8181818181818181No Hit
ATATAAAAGATAATATTGAAGGAGAACTCACATTTGGGTATTTTAAGTCC11.8181818181818181No Hit
GCCTAGCTAATTATGTATTTTTGGTAGAGACAGGGTTTCACCATGTTGAC11.8181818181818181No Hit
GGGCGGAGCGCGGCGGCACAAGAGGATGGGCCCAGGTTGGCGGGGCCGAA11.8181818181818181No Hit
GTCGGGTACCTTGGGAGCAAGGAGTAAGATGGGCTTTTTCTGTGTTTTTT11.8181818181818181No Hit
GGGGGGAAGTGGTTGTGGGGGGGGTGGGGGGGGGGGGGGGGGGCGGGGGG11.8181818181818181No Hit
GTCAGACGCCCCCAGGGTCCCGGGCCGGGCCCCGGGGAGCGCCCGGAGGC11.8181818181818181No Hit
CCGCGCACGGCGTCGAGCCGCCGCCTGCCCGCACGGGCCCACGCGCTGCC11.8181818181818181No Hit
GGCGGTTGCCTGCCGCTTGGTGCGCGGGGTGCTCAGAATCTGCGGGGGGT11.8181818181818181No Hit
GTTGTGAGCGGCAGGGGCGGCGGCCCCCGGCCCCCGGGATGTGTGGCAGG11.8181818181818181No Hit
GTGATGAGATGGGAGAAGTTTAGACAACTGCTCTAGGCTGCGTCTCTACA11.8181818181818181No Hit
GGTTTTTGTTGTTGTTGTTGTTGTTGATGTTGTTGTTGTTGTTACAGTTG11.8181818181818181No Hit
CCACAAGATGCCTGTGCCCTTGAAGCACGCCCTGCAGATTAATTAGAACT11.8181818181818181No Hit
GCGGGGGGCGGGGGGCGGGGGGGGGGGGGTTTGGGGGGGCGGGGGGGGGG11.8181818181818181No Hit
GTTCATGCATTCTGGACCTAATTGTTTTATCAGCTATGTGATTAGCAAAA11.8181818181818181No Hit
CCTCGCTCTTCCTTCCGCCTCCCGTCCTCCCTCTCTACCTCCTTGGCGCC11.8181818181818181No Hit
TCCCGGGAGAGGGCGGATGAGAGGGGGTTGGGGGTGACCGGGGAGGCATT11.8181818181818181No Hit
ATACATCTTAATGCAGGAAATGAACTGAAATGAACCTGCAGCCTGAGCAT11.8181818181818181No Hit
GTTCAAGTAGTTGGGGCGGAGGCCTTCCAGTGCCTAAGTAATATGTGGTT11.8181818181818181No Hit
GGCAGATCATAGCTGTCAAGCTCTCGGCATACGCCATGGACGGACAGGAG11.8181818181818181No Hit
GCTTGGGGGAACGCGGCTTGCCGGTGTTCCCAGCCGGACATAGCTCCTGG11.8181818181818181No Hit
ATACAAAGAACAGATTTTGTACTGCTTGAGCACTATTTTGGACTCTTGAG11.8181818181818181No Hit
GGATTTGAGACAGGGTCTCACTCTGTCGCCCAGGCTGGAGTGCAGTGGCC11.8181818181818181No Hit
GACAAGAGCTGTGCACTTGAGGCCCACTCATGTTCCTGATGTAAAGGCCT11.8181818181818181No Hit
GGCTGGCATTACTATCTTACTCTGCTGAAAAGGCCGGGGAGTACGTTTAA11.8181818181818181No Hit
GTAATATTCTCTCTGCTTTTAAGGGAAAAGGGAGGAAGGACCAGGAAGAT11.8181818181818181No Hit
TCCCGAAATCGGGTTCTCATCTTTATCAAACTTAGTGACGCTGATTAGCC11.8181818181818181No Hit
GGGGGGCGCCGCGGGGCGGGGGGGGGGGGCGGCGGGGCCGCGGGGTGGGG11.8181818181818181No Hit
CTAATAGGTGATCAATTTAAGAGAATGTTGTTTTCTGGGTAGTTAGAGTT11.8181818181818181No Hit
GTGTGTGTGTGTGTGTGTGTGTGTGTGTATGTGCGTGTGCGTGCACATGT11.8181818181818181No Hit
GAATAAAGGATAAGAAGAGTAGGCAGATTAAGCACCGGCGCCTGTAGCCC11.8181818181818181No Hit
GGGTGGGTCGGGGGGGGGGGGGGGGCGGGGGGGCTGGCGGGGGGGGGGGG11.8181818181818181No Hit
GATGTGCGCCTTGGAGGGTATACCGCTAAAAGTATTCCCTTCAGGAGTGA11.8181818181818181No Hit
GGCTGGGGGCGGGGGGGGGCGTGGGTGGGGGGGGGGGGGGGGGGGGGGGG11.8181818181818181No Hit
GGCCTCATGCGCCGCGCCGATGGACCGACTGAGCCCGTGACGGTGAGCAT11.8181818181818181No Hit

[OK]Adapter Content

Adapter graph

[OK]Kmer Content

No overrepresented Kmers