FastQCFastQC Report
Mon 28 Jan 2019
HGY2NBGX9_n02_S_114.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHGY2NBGX9_n02_S_114.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences32581
Sequences flagged as poor quality0
Sequence length151
%GC42

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[WARN]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GGGTCTA100.0070763985144.8848145
TACGCGT100.0070763985144.88484
GTACGCG100.0070763985144.88483
TATTCCA400.00601752854.3317955
ATTCCAT3655.7200836E-515.8777856
Produced by FastQC (version 0.11.5)