FastQCFastQC Report
Mon 28 Jan 2019
HGY2NBGX9_n01_S_76.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHGY2NBGX9_n01_S_76.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences11
Sequences flagged as poor quality0
Sequence length151
%GC36

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AAAACACAAATAATACATAAACATGTGACAGAGAAACAAAAAGGCATTAT19.090909090909092No Hit
AACCAAAAATCAAAAAAACTTAATCAACAAAAACCAATGTTACATAAAAC19.090909090909092No Hit
GCCCATATCTGTCAAGGATGTGGGGAAACAGATGCACACGCACTATACTG19.090909090909092No Hit
CCCTGCGCACAAACTGCGGTGTGATGTGTGCATTCACGGCACACACGTTC19.090909090909092No Hit
GTTTGGGACACAGGCTCCCACTCAAGGGTAGCTCCTTGTGTCTGGTGCCT19.090909090909092No Hit
AAGAATGACATAGACTTATAAGAAACTAATAAACAGTTAGGGGTATTTGC19.090909090909092No Hit
ATACACATGAAAATATAAGTAATTTGTTCAACTAAAAGGCCGTAAATCAT19.090909090909092No Hit
GTGTGACCTACATTCAAGAAAACTCGTTGTTGGGCACAACTGTTTTCCAA19.090909090909092No Hit
CTCAAAAAAATTTACATTAAAAAAACAAAGATAACCAACAAAAAGTGGGG19.090909090909092No Hit
ATTCCATTCCATTCCATTCCGTTCCATTCCATTCCATTCCATTCCATTCT19.090909090909092No Hit
CAAAAGGAGATATACAGATGGCAAATAAGCATATGAAAAGATGTTCAACA19.090909090909092No Hit

[FAIL]Adapter Content

Adapter graph

[OK]Kmer Content

No overrepresented Kmers

Produced by FastQC (version 0.11.5)