FastQCFastQC Report
Fri 22 Nov 2024
HGWW3DRX5_n02_G3_3d_3.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHGWW3DRX5_n02_G3_3d_3.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences22476880
Sequences flagged as poor quality0
Sequence length101
%GC51

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG5081272.2606651812885064No Hit
GTTTGGTCAAGTCCTGCAACGAGCGCAACCCCTATCTTTAGTTACTAACA370740.16494282124565332No Hit
GGACAGTGTGTGGTGGGTAGTTTGACTGGGGCGGTCGCCTCCTAAAGGGT364600.1622111253875093No Hit
GTTAAATCCCGGGGCTCAACCCCGGCTCGCTTTGGATACTAGCAAACTAG364140.16200647064895127No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGTGGGGGGGGGGGGG361490.16082748139421485No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGTGG342640.15244108612939164No Hit
CTTGGGTCTGGAAGTCGATGAAGGACGTGATTACCTGCGATAAGCCTCGG316130.1406467445659718No Hit
GGTTCGTCCACCCAGGGTTAGTCGGGTCCTAAGACGAGGCCGAAAGGCGT292450.13011147454628932No Hit
GTTTCTTAAACAGCTAGGATGTTGGCTTAGAAGCAGCCACCGTTTAAAGA273720.12177846747413341No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGTGGGGGGGGGGGGGG268680.1195361633821064No Hit
AGAACGGCGGATTCTCAATCCGTATGTCACTGGTTCGAGTCCAGTCAGAG250120.11127878958289583No Hit
GTCGGGTCCTAAGACGAGGCCGAAAGGCGTAGCCGATGGACAACAGGTTA240270.10689650876812085No Hit
CTGACCTGCACGAAAGGAGTAATTATCTCTTAACTGTCTCGACAATAGAC237230.10554400788721566No Hit
CTTACCCACTCTTGACATCCTTCGCAAAGCTATAGAGATATAGTGGAGGT236590.10525927085965668No Hit
GCGAAATTCCTTGTCGGCTAAATACTGACCTGCACGAAAGGAGTAATTAT235590.10481436925409576No Hit
GGGAAGGATAATTTTACCACTAATTGGATTGTGGGGTAAGTAACAACTGG234960.10453408124259239No Hit
GTTTAGCCGGGTCGAGAGACTGAACGGCCACATTGGGACTGAGATACGGC233100.10370656425624908No Hit
GTCGGTTCCAAGGGTTGGGCTGTTCGCCCATTAAAGCGGTACGCGAGCTG231790.1031237431529643No Hit
GGGAGACGTTGATGCTTGAACGCTAGTTTAAGAGTAGTCGCCGTTGAAAT229290.10201148913906201No Hit
CGACAATAGACTCGGTGAAATTATGGTTCCGGCGAAGACGCCGGAGACCC227230.10109499183160653No Hit
TGAACGGCCACATTGGGACTGAGATACGGCCCAAACTCCTACGGGAGGCA227090.10103270560682799No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)