FastQCFastQC Report
Fri 22 Nov 2024
HGWW3DRX5_n02_G3_2d_1.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHGWW3DRX5_n02_G3_2d_1.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences10654479
Sequences flagged as poor quality0
Sequence length101
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG3172852.97794946144246No Hit
CTTGGGTCTGGAAGTCGATGAAGGACGTGATTACCTGCGATAAGCCTCGG188750.17715554181485552No Hit
GTTTGGTCAAGTCCTGCAACGAGCGCAACCCCTATCTTTAGTTACTAACA182020.1708389495159735No Hit
GTTAAATCCCGGGGCTCAACCCCGGCTCGCTTTGGATACTAGCAAACTAG180390.16930907649261875No Hit
GGACAGTGTGTGGTGGGTAGTTTGACTGGGGCGGTCGCCTCCTAAAGGGT160380.15052824262922665No Hit
TGAACGGCCACATTGGGACTGAGATACGGCCCAAACTCCTACGGGAGGCA147720.13864591595703551No Hit
GTTTAGCCGGGTCGAGAGACTGAACGGCCACATTGGGACTGAGATACGGC128030.12016542526387258No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGTGGGGGGGGGGGGGG126110.11836336624249763No Hit
GGGAAGGATAATTTTACCACTAATTGGATTGTGGGGTAAGTAACAACTGG123500.11591369226031606No Hit
GTTTCTTAAACAGCTAGGATGTTGGCTTAGAAGCAGCCACCGTTTAAAGA122480.1149563484052106No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGTGG119500.11215940263245158No Hit
CCGAACCGCAGTACGCTAAAAAGTGCCCGGATGACTTGTGGGTAGGGGTG119010.11169950215303819No Hit
GGTTCGTCCACCCAGGGTTAGTCGGGTCCTAAGACGAGGCCGAAAGGCGT117840.11060137243688781No Hit
TGAACGCTGGCTGTGTGCCTAATACATGCATGTCGAGCGAGGTTAGCAAT117210.11001007182049914No Hit
GAAAACTATTGTCAAGGAACTCTGCAAATTCATCCCGTAAGTTCGCAAGA115790.10867729900260725No Hit
GGGAGACGTTGATGCTTGAACGCTAGTTTAAGAGTAGTCGCCGTTGAAAT115060.107992141145522No Hit
CTTGTGGGTAGGGGTGAAATTCCAATCGAACTTGGAGATAGCTGGTTCTC114920.10786074100854674No Hit
CCTGGCTCAGGATGAACGCTGGCTGTGTGCCTAATACATGCATGTCGAGC114390.10736329763285468No Hit
GTTTTTGGTGGATGCCTTGGGTCTGGAAGTCGATGAAGGACGTGATTACC112880.10594605329833585No Hit
GGATTAGATACCCTGGTAGTCCACGCCGTAAACGATGATCATTAGTCGGT108380.10172247746698829No Hit
CGACAATAGACTCGGTGAAATTATGGTTCCGGCGAAGACGCCGGAGACCC107630.10101854816176371No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)