FastQCFastQC Report
Fri 22 Nov 2024
HGWW3DRX5_n02_G3_1d_2.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHGWW3DRX5_n02_G3_1d_2.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences16716069
Sequences flagged as poor quality0
Sequence length101
%GC51

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG6103343.651181387202936No Hit
CTTGGGTCTGGAAGTCGATGAAGGACGTGATTACCTGCGATAAGCCTCGG337800.20208100361394774No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGTGGGGGGGGGGGGGGG285460.17076981436245567No Hit
GGACAGTGTGTGGTGGGTAGTTTGACTGGGGCGGTCGCCTCCTAAAGGGT281390.16833503140002593No Hit
GTTAAATCCCGGGGCTCAACCCCGGCTCGCTTTGGATACTAGCAAACTAG247880.14828845226709703No Hit
GTGAAACCCTGTCTGAATTTGCCGGGACCACCCGGTAAGGCTAAATACTA239400.14321548923972496No Hit
GTTTGGTCAAGTCCTGCAACGAGCGCAACCCCTATCTTTAGTTACTAACA221530.13252517682237375No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGTGG219960.1315859607901834No Hit
GTTTAGCCGGGTCGAGAGACTGAACGGCCACATTGGGACTGAGATACGGC209920.12557976399834195No Hit
GGTTCGTCCACCCAGGGTTAGTCGGGTCCTAAGACGAGGCCGAAAGGCGT207290.12400642758773009No Hit
GTCGGTTCCAAGGGTTGGGCTGTTCGCCCATTAAAGCGGTACGCGAGCTG207140.12391669357191575No Hit
AGAACGGCGGATTCTCAATCCGTATGTCACTGGTTCGAGTCCAGTCAGAG201630.12062046405766812No Hit
GGGAAGGATAATTTTACCACTAATTGGATTGTGGGGTAAGTAACAACTGG198650.11883774827682272No Hit
GTGAAATTCCCGTAAGCGAAATGTATAAATCTCCTAGCAGTATCCTGAGT175860.10520416014076037No Hit
GCTTAATCTACCTTTTAGATTGGAATACCCATTGGAAACAATGGCTAATG167480.10019101979059788No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)