FastQCFastQC Report
Fri 14 Jul 2023
HGWL2AFX5_n01_daplib_LerAmpPoolHm-input_ac6.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHGWL2AFX5_n01_daplib_LerAmpPoolHm-input_ac6.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences17
Sequences flagged as poor quality0
Sequence length76
%GC36

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGATGTCAACAAAGTACACTTATATTTTCTGTCAAATATCAGGAAAGAAC15.88235294117647No Hit
ACCACGGAGTCTTTCAATGTCTTCCTTGTTCATTAACCATTGATCACGTC15.88235294117647No Hit
AAGAAAATAGTGTTTCCCCTAACTATTAATAATTTCATAGATAATTCACC15.88235294117647No Hit
TTCTAACAAGGATACAATTCTTACGCCTTTAAGATTCGGTTGCAGATCGG15.88235294117647No Hit
ACTAACCAACCTTCTTCTTGCTTCTCAAAGCTTTCATGGTGTAGCCAAAG15.88235294117647No Hit
ATGATGTGAGGGATCTAACGATGCTTCTGAATGGTAAGTGACATGTGCAC15.88235294117647No Hit
GTCTCGATGATTCTTACTTTTTACCCTCAAAGCACGAATCTAAAATCTCA15.88235294117647No Hit
AAATAACATACCTGATCATAATCCAGATTAAACTTCATATATTCATCCTC15.88235294117647No Hit
GAAATGTATTGAATCGATTCTTTTTAATGAAGAGACCTGATCGCAACTTC15.88235294117647No Hit
GTAGCCATTCTGGTATCGAGAGGTTCTTGGGAGGAAGATTGTCTAGACTT15.88235294117647No Hit
CGAAGATAAAAGTACATCAAATCCATATGAAGTTTTCCCATGAGCAGATT15.88235294117647No Hit
TATCTTTAAATGTATTCTTATACATGTACACTGTGTCGCATTTAAGCAGT15.88235294117647No Hit
TATCACAACTTTGTTTTCTCAATGAAAGCGAGCAACCCAGTGATCATGGT15.88235294117647No Hit
AAGTTCTTATACTCAATCATACACATTCCATCAAGTCATATTCGACTCCA15.88235294117647No Hit
TAAGCAAGTACATAAATATACTCCCGAAAAAAAAGTGGATATAGAAAACT15.88235294117647No Hit
GAGCGCTAATACAAAAACACAACGAAGACATAATAATCATTTTGCAATGT15.88235294117647No Hit
AGGGGAAAAAAAAAAAAAAAAAAAACCCCCAAAAAAAAACAAAACAATAC15.88235294117647No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)