HGWHTBGX7_n02_cdna_b.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	HGWHTBGX7_n02_cdna_b.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	124340384
Sequences flagged as poor quality	0
Sequence length	50
%GC	47

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
AAGCAGTGGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT	8690235	6.9890688129127865	No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	807986	0.6498178419651656	No Hit
GCAGTGGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT	559810	0.4502237985689348	No Hit
AGCAGTGGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT	357704	0.28768127336650334	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
AAGCAGT	1003045	42.37224	1
AGCAGTG	1052260	40.310024	2
TCAACGC	1105430	38.36797	12
ATCAACG	1106440	38.36238	11
TGGTATC	1103570	38.354034	7
GTGGTAT	1105380	38.308426	6
CAACGCA	1109700	38.256752	13
GTATCAA	1111120	38.152336	9
TATCAAC	1114165	38.137695	10
AGTGGTA	1112340	38.098984	5
GGTATCA	1112395	38.097836	8
CAGTGGT	1117080	37.89878	4
AACGCAG	1121280	37.882557	14
ACGCAGA	1124000	37.744553	15
AGAGTAC	1114950	37.638218	19
CGCAGAG	1128810	37.59188	16
GCAGAGT	1129725	37.360012	17
CAGAGTA	1129600	37.307262	18
GAGTACT	1118150	37.251465	20
GTACTTT	1113885	37.190594	22