HGWHTBGX7_n02_cdna_a.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	HGWHTBGX7_n02_cdna_a.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	76202122
Sequences flagged as poor quality	0
Sequence length	50
%GC	47

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
AAGCAGTGGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT	5462420	7.168330561713229	No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	468588	0.6149277575236028	No Hit
GCAGTGGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT	339912	0.4460663182056793	No Hit
AGCAGTGGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT	219785	0.2884237265728637	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
AAGCAGT	629680	42.36027	1
AGCAGTG	658940	40.406586	2
TCAACGC	689430	38.600834	12
ATCAACG	690180	38.59344	11
TGGTATC	688845	38.55326	7
GTGGTAT	689720	38.519165	6
CAACGCA	691940	38.490837	13
TATCAAC	694785	38.375977	10
GTATCAA	693625	38.33915	9
GGTATCA	693460	38.32997	8
AGTGGTA	694520	38.27811	5
AACGCAG	699060	38.106792	14
CAGTGGT	697140	38.10505	4
ACGCAGA	700605	37.98683	15
AGAGTAC	695420	37.861168	19
CGCAGAG	703225	37.85151	16
GCAGAGT	704535	37.581284	17
CAGAGTA	704725	37.513027	18
GAGTACT	696945	37.504524	20
GTACTTT	694265	37.42563	22