FastQCFastQC Report
Wed 30 Jun 2021
HGW2MDRXY_1.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHGW2MDRXY_1.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1990389104
Sequences flagged as poor quality0
Sequence length28
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CATTTGAATATTTGCTACTACCACCAAG42603280.21404498203081002No Hit
ACATTATTCTATCAACTAGAGGCTGTTC40403980.20299538376090304No Hit
ATATTGTGTGGAGCAAAGAAATCACCGC22065400.11085973067103366No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)