FastQCFastQC Report
Mon 22 Aug 2022
HGVMVDRX2_n01_OakI_Fluc_C.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHGVMVDRX2_n01_OakI_Fluc_C.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences52386870
Sequences flagged as poor quality0
Sequence length101
%GC37

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
TATATATACAGGCAACACGCAGATATAGGTGCGACGTGAACAGTGAGCTG1005230.1918858675847593No Hit
GTATATATATATACATGAGAAGAACGGCATAGTGCGTGTTTATGCTTAAA552460.10545772251711162No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)