HGVKWBGX2_n01_sl40_bzip1ab_c04.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	HGVKWBGX2_n01_sl40_bzip1ab_c04.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	27108424
Sequences flagged as poor quality	0
Sequence length	75
%GC	48

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GATCGGAAGAGCACACGTCTGAACTCCAGTCACTGACCAATCTCGTATGCCGTCTTCTGCTTGAAAAAAAAAAGG	1993155	7.352529973708542	TruSeq Adapter, Index 4 (100% over 63bp)
GATCGGAAGAGCACACGTCTGAACTCCAGTCACTGACCAATCTCGTATGCCGTCTTCTGCTTGAAAAAAAAAAAG	168107	0.6201282671393955	TruSeq Adapter, Index 4 (100% over 63bp)
GATCGGAAGAGCACACGTCTGAACTCCAGTCACTGACCAATATCGTATGCCGTCTTCTGCTTGAAAAAAAAAAGG	42878	0.15817223457918467	TruSeq Adapter, Index 4 (98% over 63bp)
CCCCCACCCACGAGGAGCATCGTGGAAAAAGAAGACGTTCCAACCACGTCTTCAAAGCAAGTGGATTGATGTGAT	39861	0.14704285280472223	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GCCGTCT	258735	67.44355	49
CGTATGC	259980	67.4176	44
TATGCCG	259475	67.40692	46
GTATGCC	259685	67.399734	45
TGCCGTC	259125	67.38898	48
TCTCGTA	250910	67.37789	41
ATGCCGT	259560	67.36728	47
AATCTCG	249770	67.358475	39
ATCTCGT	250895	67.3218	40
CCGTCTT	259330	67.28203	50
TGCTTGA	259900	67.2353	58
GCTTGAA	260185	67.2214	59
ACCAATC	245710	67.2115	36
ACTGACC	254535	67.09242	32
CTTGAAA	261535	67.04615	60
AGTCACT	263015	66.73248	28
TCTGAAC	271630	65.763374	18
CGTCTGA	272400	65.587296	16
ACGTCTG	272935	65.44628	15
CTGCTTG	266980	65.393715	57