HGVJGBGX2_n01_9s-16_dr.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	HGVJGBGX2_n01_9s-16_dr.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	15356149
Sequences flagged as poor quality	0
Sequence length	75
%GC	53

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GATCGGAAGAGCACACGTCTGAACTCCAGTCACTAGCTTATCTCGTATGCCGTCTTCTGCTTGAAAAAAAAAAGG	150840	0.9822775228346639	TruSeq Adapter, Index 10 (100% over 63bp)
TTTTTCCACCTTAGAGTACAAACGGAACACGAGAATTTTTACCCTACAGAGTAACCTAGATTGATCAAACAGTCC	25737	0.16760061392996384	No Hit
CCGGAACCCAAAGACTTTGATTTCTCATAAGGTGCCGGCGGAGTCCTATAAGCAACATCCGCCGATCCCTGGTCG	21236	0.13828987983901433	No Hit
CCGACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACT	17441	0.11357665258392582	No Hit
CTGACATGCGTGCGAGTCGACGGGTTCTGAAACCTGGGATGCGCAAGGAAGCTGACGAGCGGGAGGCCCTCACGG	16539	0.10770278407691929	No Hit
GCCAGTAGTCATATGCTTGTCTCAAAGATTAAGCCATGCATGTGCAAGTATGAACTAATTCGAACTGTGAAACTG	15359	0.1000185658526757	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CTCGTAT	20760	64.46243	42
TATGCCG	22120	64.13101	46
TCGTATG	21910	64.102005	43
ATGCCGT	22550	62.571342	47
GTATGCC	22715	62.5431	45
CTTATCT	22030	61.841675	37
AGTCACT	24180	61.677834	28
TATCTCG	21955	61.488247	39
ACGTCTG	24475	61.45835	15
TTATCTC	22105	61.351524	38
CAGTCAC	24475	60.906223	27
CACGTCT	24855	60.546295	14
GCCGTCT	22805	60.480347	49
ACACGTC	25040	60.250526	13
GTCTGAA	25385	59.268982	17
CGTATGC	23930	59.19556	44
TGCCGTC	23760	58.978294	48
CCGTCTT	23455	58.923286	50
CTGAACT	26350	57.05783	19
AAAAAGG	22100	56.041454	69