HGVJGBGX2_n01_4w-36_dr.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	HGVJGBGX2_n01_4w-36_dr.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	15611100
Sequences flagged as poor quality	0
Sequence length	75
%GC	53

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
TTTTTCCACCTTAGAGTACAAACGGAACACGAGAATTTTTACCCTACAGAGTAACCTAGATTGATCAAACAGTCC	25362	0.16246132559524953	No Hit
GATCGGAAGAGCACACGTCTGAACTCCAGTCACCAGATCATCTCGTATGCCGTCTTCTGCTTGAAAAAAAAAAGG	25009	0.16020011402143347	TruSeq Adapter, Index 7 (100% over 63bp)
CCGACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACT	20079	0.12862002037012124	No Hit
CTGACATGCGTGCGAGTCGACGGGTTCTGAAACCTGGGATGCGCAAGGAAGCTGACGAGCGGGAGGCCCTCACGG	18213	0.11666698695159214	No Hit
CCGGAACCCAAAGACTTTGATTTCTCATAAGGTGCCGGCGGAGTCCTATAAGCAACATCCGCCGATCCCTGGTCG	16680	0.10684705113669121	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CTCGTAT	3980	55.390507	42
TCGTATG	4420	53.466835	43
TATGCCG	4415	53.44719	46
ACGTCTG	5115	48.96678	15
GTATGCC	4940	48.326366	45
CACGTCT	5400	46.38242	14
CAGTCAC	5340	45.86827	27
ATGCCGT	5225	45.690094	47
ACACGTC	5560	45.48202	13
GTCTGAA	6150	40.83783	17
GCCGTCT	5865	39.587204	49
AGTCACC	6370	38.505737	28
TGTTACC	4555	37.491028	13
CCGTCTT	6255	37.395306	50
TTTTTCC	8385	37.126953	1
TAGTTGT	4775	35.185696	9
TTACCTC	5050	33.952797	15
CATCTCG	6560	33.922024	39
TGCCGTC	7185	33.65862	48
CGTATGC	7125	33.555134	44