HGVH7AFX2_n02_vk8-11.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	HGVH7AFX2_n02_vk8-11.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	6142086
Sequences flagged as poor quality	0
Sequence length	76
%GC	41

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	20999	0.34188710480445894	No Hit
CGGGAAGAGATTTAGTATGTGGGACAGAATGTCGGCGGCAGTATTGAGAC	14528	0.23653201860084666	No Hit
TGGGGTGGTATAGTCCGCATTGGGATGTTACTTTCCTGTTATGGCATGGA	14055	0.22883105186088243	No Hit
CGGGAAGGAATAAGAAGCAACTAAACGAGGGTGTAGAAAAAGACGAAGAG	11942	0.19442905879207814	No Hit
GCGGCAGTATTGAGACCATGAGAGTAGCAAACGTAAGTCTAAAGGTTGTT	7414	0.1207081763426953	No Hit
TGGGTGGAGGACAATTTTTATTATATTTCATCTAATAGCAATAGGATATG	7407	0.12059420854738927	No Hit
GTGCAAGATGAATAGCCAGTGCAATATATACATGTATACTTAACAGATAT	7024	0.1143585420327882	No Hit
CGGCAAAATGTTAGTGCAGGAAAGCGGGAAGGAATAAGAAGCAACTAAAC	6537	0.1064296397022119	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TGTCGGC	4330	29.09804	30
GTGGGAC	4505	28.04562	19
CGGCGGC	4700	26.733093	33
TCGGCGG	4780	26.139027	32
CGTATCA	12675	25.846498	56
CCGTATC	12790	25.614105	55
CATTAAA	13355	25.446909	61
GAATGTC	5010	25.218462	27
GAAGCGT	5300	25.028025	69
AAAGGGG	7070	24.999723	70
CGAGATC	1555	24.757965	5
GTATCAT	13020	24.597105	57
CGCCGTA	13650	24.410583	53
CGCGCAG	245	24.313948	1
TCATTAA	13700	24.218513	60
AAGCGTA	5525	24.072132	70
GTCGGCG	5235	23.800299	31
AATGTCG	5335	23.747791	28
GCCGTAT	14500	23.293415	54
GTGCAGG	2775	23.080452	14