HGV7YBGX2_n01_4w-33_dr.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	HGV7YBGX2_n01_4w-33_dr.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	9391804
Sequences flagged as poor quality	0
Sequence length	75
%GC	51

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GATCGGAAGAGCACACGTCTGAACTCCAGTCACACTGATATATCTCGTATGCCGTCTTCTGCTTGAAAAAAAAAA	94481	1.0059941625698323	TruSeq Adapter, Index 25 (97% over 44bp)
TTTTTCCACCTTAGAGTACAAACGGAACACGAGAATTTTTACCCTACAGAGTAACCTAGATTGATCAAACAGTCC	16789	0.17876224844555957	No Hit
GTCAATTCCTTTGAGTTTCATTCTTGCGAACGTACTCCCCAGGCGGGATACTTAACGCGTTAGCTACAGCACTGC	13625	0.14507330008164565	No Hit
CTTAAACCTATAACCATCTTTCGGCTAACCTAGCCTCCTCCGTCCCTCCGTACCAACAAGGGGTAGTACAGGAAT	12333	0.13131662458032559	No Hit
CTTGCTTTGAGCACTCTAATTTCTTCAAAGTAACGGCGCCGGAGGCACGACCCGGCCAGTTAAGGCCAGGAGCGC	12326	0.13124209150872398	No Hit
CTTTGAGCACTCTAATTTCTTCAAAGTAACGGCGCCGGAGGCACGACCCGGCCAGTTAAGGCCAGGAGCGCATCG	10679	0.11370552451903809	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CTCGTAT	11510	63.4189	44
TCGTATG	12295	63.016937	45
ACGTCTG	12725	62.89323	15
CGTATGC	12435	62.474236	46
GTCACAC	12695	62.197166	29
TATGCCG	12430	62.110493	48
CACGTCT	12920	61.99805	14
TATCTCG	11915	61.118473	41
ACACGTC	13250	60.740665	13
AGTCACA	13280	59.639133	28
GTATGCC	13000	59.57294	47
ATGCCGT	12995	59.356945	49
CAGTCAC	13385	58.99089	27
TCACACT	13450	58.62887	30
ACTGATA	13530	58.40999	34
GCCGTCT	13295	57.990993	51
GTCTGAA	13990	57.253193	17
TATATCT	12825	57.075863	39
ATATCTC	12895	56.766933	40
CCGTCTT	13600	56.69077	52