FastQCFastQC Report
Fri 15 Mar 2019
HGTYHAFXY_n02_r4zt2s44.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHGTYHAFXY_n02_r4zt2s44.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences11
Sequences flagged as poor quality0
Sequence length76
%GC19

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[FAIL]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCGATAG19.090909090909092No Hit
AACTCACGGGGGGAGTGCTCTTCCGAAAAAAAAAAAAAAAAAAAAAAAAA19.090909090909092No Hit
CAACCAATCTTCACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA19.090909090909092No Hit
ACCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA19.090909090909092No Hit
ATAAAACGAATAAACACATCCGAAAAAAAAAAAAAAAAAAAAAAAAAAAA19.090909090909092No Hit
ACACAAAAAAATAAACTCATCCAAAAAAAAAAAAAAAAAAAAAAAAAAAA19.090909090909092No Hit
CCATAAAAGTATACTCTTCCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA19.090909090909092No Hit
ATAACAAAAGAGAGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA19.090909090909092No Hit
CAGAGGGGAGACGGGTGCTCAACCGATCAGATGAGGGAGACGGGTGCTCG19.090909090909092No Hit
GCGCGGGACTGCTCTTCCGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA19.090909090909092No Hit
GAAGACAAAAAATATACCAAACTACAAAAAAAGACAAAAACTCTAAAAAA19.090909090909092No Hit

[OK]Adapter Content

Adapter graph

[OK]Kmer Content

No overrepresented Kmers

Produced by FastQC (version 0.11.5)