FastQCFastQC Report
Fri 15 Mar 2019
HGTYHAFXY_n02_r4zt14tc2s84.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHGTYHAFXY_n02_r4zt14tc2s84.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences12
Sequences flagged as poor quality0
Sequence length76
%GC9

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[FAIL]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ATATATTAATGTGTGATATTAAGAAAAAAAAAAAAAAAAAAAAAAAAAAA18.333333333333332No Hit
CAAACAATATAAAAAAAAATACTCTTCCAAAAAAAAAAAAAAAAAAAAAA18.333333333333332No Hit
CAACCAAACAGGGAGAAGAAATACACAACCAAAAAAAAAAAAAAAAAAAA18.333333333333332No Hit
AAGACGAAAAGTACACAACCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA18.333333333333332No Hit
CAAACAAACTAAACAAAATATACTCTTCCAAAAAAAAAAAAAAAAAAAAA18.333333333333332No Hit
CAACCAATCAAACAAAAAAACACATCCAAAAAAAAAAAAAAAAAAAAAAA18.333333333333332No Hit
CTTCCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA18.333333333333332No Hit
AAAAAAATAAAAAAAAAAAAAATAATCCAAAAAAAAAAAAAAAAAAAAAA18.333333333333332No Hit
CTTCCAATCTATTTCAAAAAACATATACTCTTCCAATCTACATTAAAAAA18.333333333333332No Hit
AAAAACAAAACCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA18.333333333333332No Hit
CTCGGGTGGGGTGCTCTTCCGAAAAAAAAAAAAAAAAAAAAAAAAAAAAA18.333333333333332No Hit
CGAAAAATAAACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA18.333333333333332No Hit

[OK]Adapter Content

Adapter graph

[OK]Kmer Content

No overrepresented Kmers

Produced by FastQC (version 0.11.5)