FastQCFastQC Report
Fri 15 Mar 2019
HGTYHAFXY_n02_r4zt14tc2s36.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHGTYHAFXY_n02_r4zt14tc2s36.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences16
Sequences flagged as poor quality0
Sequence length76
%GC16

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CTAAAAAAAAAAAAAAAAAAATAAAAAATTCCAAAAAAAAAAAAAAAAAA16.25No Hit
AATACAATATAAAAAAAATACTCTTCCAAAAAAAAAAAAAAAAAAAAAAA16.25No Hit
AACATATACACTTCCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA16.25No Hit
CATCCGAAATGGAAAGGGAAAAACTCTTCCAAAAAAAAAAAAAAAAAAAA16.25No Hit
AATAAAAAAAAAATTAAAATAAAATATTACGAAAAAAAAAAAAAAAAAAA16.25No Hit
AAAAAAAAAAAAAATAAAAAAAAATATACTCTTCCGAAAAAAAAAAAAAA16.25No Hit
ATTCAAAAAAAAACAAAAATATACTCTTCCAAAAAAAAAAAAAAAAAAAA16.25No Hit
GAGATCTAACAATATAGGCTGAGATGTACTCTTCCAAAAAAAAAAAAAAA16.25No Hit
AAAAAAAAAAAACACAAATACTCAACCAAAAAAAAAAAAAAAAAAAAAAA16.25No Hit
AACAAAAACAGGAAAAACTCTTCCGAAAAAAAAAAAAAAAAAAAAAAAAA16.25No Hit
CAAATAAGATATGCTCTTCCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA16.25No Hit
AAAAAATTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA16.25No Hit
ATAACGATCTGAACGGAAGTGTGCTCTTCCAAAAAAAAAAAAAAAAAAAA16.25No Hit
TTTTGGAAGAGAACACGTCACTATCAAGATCGGAAGAGCACCTGTCTCTT16.25No Hit
CTTCCGATCTTGGGCGGGGACGCTTACCCCATAGTCTTGGGAGAGGGAAC16.25No Hit
CTTCTAACCCATATGTTGTTTAGAGTGAATTTTTTAGTTTCCAAACTCTG16.25No Hit

[WARN]Adapter Content

Adapter graph

[OK]Kmer Content

No overrepresented Kmers

Produced by FastQC (version 0.11.5)