FastQCFastQC Report
Fri 15 Mar 2019
HGTYHAFXY_n02_r4zt14tc2s28.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHGTYHAFXY_n02_r4zt14tc2s28.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences11
Sequences flagged as poor quality0
Sequence length76
%GC22

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AAACCAAACAGATAAGAATATACACATACAAAAAAAAAAAAAAAAAAAAA19.090909090909092No Hit
AAAACAAACACAAGAAGGAGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA19.090909090909092No Hit
ACCAAATACTCAACGCCCTATTCAGACTCGCTTTCGCTACGGCTCCACAT19.090909090909092No Hit
CAAACGAACACCAATAAGGACCTCTAACGAAAAAAAAAAAAAAAAAAAAA19.090909090909092No Hit
CTTCTCATCATAACATATAAATAATTTTTATATTAATTTATATTATAAAA19.090909090909092No Hit
GCAGGAACCTTGGCCTCGAGCTGATATTCCTGGACATCCAGGTGGAGCAG19.090909090909092No Hit
AAACACATAAAATCTAAACGAGATGCTCTTCCAAAAAAAAAAAAAAAAAA19.090909090909092No Hit
GAAAGAAGTGATCCTCGGTCATCGGCGCGTTGGCGACCACGATGTCGGCG19.090909090909092No Hit
CAAAAAAAAAAAATATTAATAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA19.090909090909092No Hit
CAACCAATATAAAACAAAATACTCTTCCAAAAAAAAAAAAAAAAAAAAAA19.090909090909092No Hit
AAATATAATATTCCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA19.090909090909092No Hit

[OK]Adapter Content

Adapter graph

[OK]Kmer Content

No overrepresented Kmers

Produced by FastQC (version 0.11.5)